RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 LYPD5Q6UWN5 251 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 TMEM182Q6ZP80 229 aaPredicted RBP4.42□□□□□ -1.7
PTCH1-211ENST00000488809 EIF4E3Q8N5X7 224 aaKnown RBP4.42□□□□□ -1.7
PTCH1-211ENST00000488809 ST6GAL2Q96JF0 529 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 ARV1Q9H2C2 271 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 MCUBQ9NWR8 336 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 MGAT4CQ9UBM8 478 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 BOLA1Q9Y3E2 137 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 H3BP45 60 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 CTDSPLO15194 276 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 ATP6V1G2O95670 118 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 SRIP30626 198 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 FAUP35544 74 aaKnown RBP4.41□□□□□ -1.7
PTCH1-211ENST00000488809 HAMPP81172 84 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 IL18Q14116 193 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 ANXA2RQ3ZCQ2 193 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 TMEM128Q5BJH2 165 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 IBA57Q5T440 356 aaKnown RBP4.41□□□□□ -1.7
PTCH1-211ENST00000488809 TEPPQ6URK8 271 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 LINC00305Q7Z4B0 112 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 ZNF546Q86UE3 836 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 LRTM2Q8N967 370 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 ZNF431Q8TF32 576 aaPredicted RBP4.41□□□□□ -1.7
PTCH1-211ENST00000488809 VGLL1Q99990 258 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 ARPC5LQ9BPX5 153 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 TXNDC17Q9BRA2 123 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 PARD6GQ9BYG4 376 aaPredicted RBP4.41□□□□□ -1.7
PTCH1-211ENST00000488809 NPVFQ9HCQ7 196 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 HHLA3Q9XRX5 114 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
PTCH1-211ENST00000488809 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
PTCH1-211ENST00000488809 TRGV4A0A0C4DH28 118 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 ANKRD20A5PA0PJZ0 165 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 C7orf71A4D174 169 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 FNDC10F2Z333 226 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 GOSR2O14653 212 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 RGS13O14921 159 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 COX7A2P2O60397 106 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 SPINK4O60575 86 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 ORM1P02763 201 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 CRYGDP07320 174 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 VAMP1P23763 118 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 CRYBA4P53673 196 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 TCL1AP56279 114 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 POLR2GP62487 172 aaKnown RBP eCLIP4.4□□□□□ -1.71
PTCH1-211ENST00000488809 KIR3DS1Q14943 382 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 GUK1Q16774 197 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 C11orf72Q8NBR9 251 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.71
PTCH1-211ENST00000488809 C9JCJ5 164 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 K7EPK0 472 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 MRPS12O15235 138 aaKnown RBP4.39□□□□□ -1.71
PTCH1-211ENST00000488809 PRAF2O60831 178 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 MPDU1O75352 247 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 IGHV3-53P01767 116 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 CT45A10P0DMU9 189 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 AP3S2P59780 193 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 ZNF415Q09FC8 603 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 SH2D6Q7Z4S9 175 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 WFDC10BQ8IUB3 73 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 LINC00528Q8N1L1 170 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 Q8N814 137 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 OR10P1Q8NGE3 313 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 MRPL53Q96EL3 112 aaKnown RBP4.39□□□□□ -1.71
PTCH1-211ENST00000488809 DIRAS2Q96HU8 199 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 C8orf49Q96NF6 230 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 MRPL32Q9BYC8 188 aaKnown RBP4.39□□□□□ -1.71
PTCH1-211ENST00000488809 PSENENQ9NZ42 101 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 CCDC59Q9P031 241 aaKnown RBP4.39□□□□□ -1.71
PTCH1-211ENST00000488809 RSL24D1Q9UHA3 163 aaKnown RBP4.39□□□□□ -1.71
PTCH1-211ENST00000488809 PRELID1Q9Y255 219 aa4.39□□□□□ -1.71
PTCH1-211ENST00000488809 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 KLLNB2CW77 178 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 E5RGE8 158 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 K7EQD1 137 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 SLC17A3O00476 420 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 ZNF253O75346 499 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 OXTP01178 125 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 GPX1P07203 203 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 NMBP08949 121 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 HOXB5P09067 269 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 SNRPCP09234 159 aaKnown RBP4.38□□□□□ -1.71
PTCH1-211ENST00000488809 IGLC2P0DOY2 106 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 PRB4P10163 310 aaPredicted RBP4.38□□□□□ -1.71
PTCH1-211ENST00000488809 RRAS2P62070 204 aaPredicted RBP4.38□□□□□ -1.71
PTCH1-211ENST00000488809 SLC38A11Q08AI6 406 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 RAB31Q13636 194 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 FHL2Q14192 279 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 TDRG1Q3Y452 100 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 C10orf113Q5VZT2 155 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 PATE2Q6UY27 113 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 Q6ZRG5 221 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 SLC25A21Q9BQT8 299 aaPredicted RBP4.38□□□□□ -1.71
PTCH1-211ENST00000488809 MIXL1Q9H2W2 232 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 MRPL16Q9NX20 251 aaKnown RBP4.38□□□□□ -1.71
PTCH1-211ENST00000488809 RCL1Q9Y2P8 373 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms