RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PRM2P04554 102 aa11.41□□□□□ -0.58
CTDSP1-209ENST00000488627 RHOBP62745 196 aa11.41□□□□□ -0.58
CTDSP1-209ENST00000488627 PDE6HQ13956 83 aa11.41□□□□□ -0.58
CTDSP1-209ENST00000488627 C11orf94C9JXX5 98 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 M0R3E3 92 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 INSP01308 110 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 HBE1P02100 147 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 GIPP09681 153 aaPredicted RBP11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 ZNF767PQ75MW2 155 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 SCGB1C1Q8TD33 95 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 FXYD5Q96DB9 178 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 ZNF503Q96F45 646 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 MRPL32Q9BYC8 188 aaKnown RBP11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 DKK2Q9UBU2 259 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
CTDSP1-209ENST00000488627 LOC102723971A0A1B0GUV8 181 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 NBEAP1P0C6P0 100 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 CDKN1BP46527 198 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 EMP1P54849 157 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 FFAR4Q5NUL3 377 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 RPP25LQ8N5L8 163 aaKnown RBP11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 OR10J6PQ8NGY7 276 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 C2CD4CQ8TF44 421 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 BLNKQ8WV28 456 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 ASB13Q8WXK3 278 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 AQP10Q96PS8 301 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 OR51M1Q9H341 326 aa11.39□□□□□ -0.59
CTDSP1-209ENST00000488627 TRAV10A0A0B4J240 114 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 ZNF705GA8MUZ8 300 aaPredicted RBP11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 EXOC3-AS1Q8N2X6 119 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 TMEM208Q9BTX3 173 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 PAXXQ9BUH6 204 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 PRELID1Q9Y255 219 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 TIMM9Q9Y5J7 89 aa11.38□□□□□ -0.59
CTDSP1-209ENST00000488627 PLAC8L1A1L4L8 177 aa11.37□□□□□ -0.59
CTDSP1-209ENST00000488627 OR10J4P0C629 311 aa11.37□□□□□ -0.59
CTDSP1-209ENST00000488627 AZU1P20160 251 aa11.37□□□□□ -0.59
CTDSP1-209ENST00000488627 FAM222AQ5U5X8 452 aa11.37□□□□□ -0.59
CTDSP1-209ENST00000488627 RNF141Q8WVD5 230 aa11.37□□□□□ -0.59
CTDSP1-209ENST00000488627 IGLL5B9A064 214 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 G3V3Q6 166 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 LY6G6CO95867 125 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 TSPOP30536 169 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 TCTAP57738 103 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 ERCC8Q13216 396 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 ICAM4Q14773 271 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 ODF3Q96PU9 254 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 LINC01587Q99440 93 aa11.36□□□□□ -0.59
CTDSP1-209ENST00000488627 DEFB131BA0A096LNP1 70 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 RNF222A6NCQ9 220 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 EIF3GO75821 320 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 TAS2R60P59551 318 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 LGALS9CQ6DKI2 356 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 PHYHIPLQ96FC7 376 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
CTDSP1-209ENST00000488627 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 OR7C2O60412 319 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 M6PRP20645 277 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 OR2T35Q8NGX2 323 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 LINC00477Q96M19 166 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 C20orf144Q9BQM9 153 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 AAMDCQ9H7C9 122 aa11.34□□□□□ -0.59
CTDSP1-209ENST00000488627 IGHV4-4A0A075B6R2 117 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 RAB2AP61019 212 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 ZNF266Q14584 549 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 ACOT6Q3I5F7 207 aaPredicted RBP11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 OR2G3Q8NGZ4 309 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 TNFSF18Q9UNG2 199 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 KMT2AQ03164 3969 aa11.33□□□□□ -0.6
CTDSP1-209ENST00000488627 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 H7BYZ3 331 aa11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 LEPP41159 167 aa11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 TAS2R45P59539 299 aa11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 RANP62826 216 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 KHDC3LQ587J8 217 aa11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 LYPD1Q8N2G4 141 aa11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 HSD17B11Q8NBQ5 300 aa11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 VGLL1Q99990 258 aa11.32□□□□□ -0.6
CTDSP1-209ENST00000488627 FXYD6-FXYD2A0A087WZ82 144 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 KLLNB2CW77 178 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 ATP6V0CP27449 155 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 UBE2L3P68036 154 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms