RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
RAPGEF3-211ENST00000488250 IGHV3OR16-8A0A075B7F1 116 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 CRIP1P50238 77 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 PRDM13Q9H4Q3 707 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 A8MWP6 167 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 SRIP30626 198 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 TPPP2P59282 170 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 KIAA1644Q3SXP7 199 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 LRRC75A-AS1Q8N1F1 130 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 SLC50A1Q9BRV3 221 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 SVEP1Q4LDE5 3571 aa12.33□□□□□ -0.44
RAPGEF3-211ENST00000488250 FASNP49327 2511 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-211ENST00000488250 IGLV1-40P01703 118 aa12.32□□□□□ -0.44
RAPGEF3-211ENST00000488250 CT45A10P0DMU9 189 aa12.32□□□□□ -0.44
RAPGEF3-211ENST00000488250 BLCAPP62952 87 aa12.32□□□□□ -0.44
RAPGEF3-211ENST00000488250 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.32□□□□□ -0.44
RAPGEF3-211ENST00000488250 PGLYRP4Q96LB8 373 aa12.32□□□□□ -0.44
RAPGEF3-211ENST00000488250 IGKV2-40A0A087WW87 121 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 F2Z2F3 143 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 HAX1O00165 279 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 IGKV2D-40P01614 121 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 APOHP02749 345 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 ARL3P36405 182 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 CFHR3Q02985 330 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 KLF5Q13887 457 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 DOPEY2Q9Y3R5 2298 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 RBAKDNA6NC62 111 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 CAMPP49913 170 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 Q6AWC8 147 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 PRR25Q96S07 402 aa12.31□□□□□ -0.44
RAPGEF3-211ENST00000488250 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 NDUFA4O00483 81 aa12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 TGFAP01135 160 aa12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 FSHBP01225 129 aa12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 DEFB113Q30KQ7 82 aa12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 MRPL53Q96EL3 112 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 C8orf49Q96NF6 230 aa12.3□□□□□ -0.44
RAPGEF3-211ENST00000488250 KRTAP10-9P60411 292 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 DEFB112Q30KQ8 113 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 C18orf32Q8TCD1 76 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 ALKBH7Q9BT30 221 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 CSMD1Q96PZ7 3565 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 ANKRD17O75179 2603 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 PTPN13Q12923 2485 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 A0A0G2JLM5 398 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 LINC00587B1AMM8 73 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 HLA-DMBP28068 263 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 IQCJQ1A5X6 159 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 Q6ZS46 218 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 C9orf139Q6ZV77 190 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 GATD1Q8NB37 220 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 KCNS1Q96KK3 526 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 ASCL2Q99929 193 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 VGLL1Q99990 258 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 CLEC5AQ9NY25 188 aa12.29□□□□□ -0.44
RAPGEF3-211ENST00000488250 FBN2P35556 2912 aa12.28□□□□□ -0.44
RAPGEF3-211ENST00000488250 A0A1B0GW15 77 aa12.28□□□□□ -0.44
RAPGEF3-211ENST00000488250 SSBP4Q9BWG4 385 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-211ENST00000488250 A0A1B0GUT8 65 aa12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 RNF223E7ERA6 249 aa12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 GPX1P07203 203 aa12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 IGHV4-31P0DP07 118 aa12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 GLMPQ8WWB7 406 aa12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 KLK15Q9H2R5 256 aa12.27□□□□□ -0.44
RAPGEF3-211ENST00000488250 TRAV8-2A0A0B4J237 113 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 IGHV3-66A0A0C4DH42 116 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 A0A1W2PS18 150 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 SH2D1AO60880 128 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 TRBV12-3P01733 135 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 IGHV4-59P01825 116 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 PF4V1P10720 104 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 SRSF2Q01130 221 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
RAPGEF3-211ENST00000488250 NBPF19A0A087WUL8 3843 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 ZNF207O43670 478 aaKnown RBP12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 PRB4P10163 310 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 BMI1P35226 326 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 PKIAP61925 76 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 RIGQ13278 110 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 FAM209BQ5JX69 171 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 C8orf86Q6ZUL3 223 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 Q6ZWC4 215 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 NDFIP1Q9BT67 221 aa12.26□□□□□ -0.45
RAPGEF3-211ENST00000488250 TMEM89A2RUT3 159 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 TMEM189A5PLL7 270 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 RPS20P60866 119 aaKnown RBP12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 SIGLECL1Q8N7X8 197 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 OR4X2Q8NGF9 303 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 IGHV3OR16-13A0A075B7E8 117 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 IGHV3-74A0A0B4J1X5 117 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 PRAC2D3DTV9 90 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 UNQ9165/PRO28630Q6UXU0 137 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 MAPK1IP1LQ8NDC0 245 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms