RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 LRP1BQ9NZR2 4599 aa10.72□□□□□ -0.69
TRIM50-203ENST00000488217 HSPG2P98160 4391 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 MBPP02686 304 aaPredicted RBP10.71□□□□□ -0.69
TRIM50-203ENST00000488217 TNP2Q05952 138 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 ZNF546Q86UE3 836 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 BPIFA4PQ86YQ2 179 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 C20orf144Q9BQM9 153 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 DNAJC4Q9NNZ3 241 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 LINC00588Q9Y4M8 146 aa10.71□□□□□ -0.69
TRIM50-203ENST00000488217 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 CCSO14618 274 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 COX7A2P2O60397 106 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 OR5I1Q13606 314 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 KIR3DS1Q14943 382 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 CCDC28AQ8IWP9 274 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 C6orf223Q8N319 242 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 RNASE8Q8TDE3 154 aaKnown RBP10.7□□□□□ -0.7
TRIM50-203ENST00000488217 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
TRIM50-203ENST00000488217 RNF141Q8WVD5 230 aa10.7□□□□□ -0.7
TRIM50-203ENST00000488217 RCL1Q9Y2P8 373 aaKnown RBP10.7□□□□□ -0.7
TRIM50-203ENST00000488217 SSNA1O43805 119 aa10.69□□□□□ -0.7
TRIM50-203ENST00000488217 RAB31Q13636 194 aa10.69□□□□□ -0.7
TRIM50-203ENST00000488217 CLINT1Q14677 625 aa10.69□□□□□ -0.7
TRIM50-203ENST00000488217 C10orf113Q5VZT2 155 aa10.69□□□□□ -0.7
TRIM50-203ENST00000488217 Q6ZRG5 221 aa10.69□□□□□ -0.7
TRIM50-203ENST00000488217 MGST2Q99735 147 aa10.69□□□□□ -0.7
TRIM50-203ENST00000488217 Q9H8V8 135 aa10.69□□□□□ -0.7
TRIM50-203ENST00000488217 C5orf51A6NDU8 294 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 FAM25EA8MYX2 175 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 H3BQ15 152 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 H3BTX0 84 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 L7N2F9 121 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 VAMP2P63027 116 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 SSX7Q7RTT5 188 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 SAT2Q96F10 170 aaPredicted RBP10.68□□□□□ -0.7
TRIM50-203ENST00000488217 PXMP4Q9Y6I8 212 aa10.68□□□□□ -0.7
TRIM50-203ENST00000488217 CT45A10P0DMU9 189 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 CAMLGP49069 296 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 BCAP31P51572 246 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 OPCMLQ14982 345 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 LINC00612Q8N6U2 182 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 GNPNAT1Q96EK6 184 aaPredicted RBP10.67□□□□□ -0.7
TRIM50-203ENST00000488217 C2orf50Q96LR7 162 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 PARD6GQ9BYG4 376 aaPredicted RBP10.67□□□□□ -0.7
TRIM50-203ENST00000488217 KRTAP4-5Q9BYR2 181 aa10.67□□□□□ -0.7
TRIM50-203ENST00000488217 TRAV26-1A0A087WT03 109 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 TRAV5A0A0B4J249 113 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 C16orf90A8MZG2 172 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 SLC17A3O00476 420 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 SIX6O95475 246 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 M6PRP20645 277 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 GUK1Q16774 197 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 RXFP4Q8TDU9 374 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 DNAH5Q8TE73 4624 aa10.66□□□□□ -0.7
TRIM50-203ENST00000488217 TRAV12-3A0A0B4J271 114 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 GAGE7O76087 117 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 CST7O76096 145 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 MED28Q9H204 178 aa10.65□□□□□ -0.7
TRIM50-203ENST00000488217 LSM5Q9Y4Y9 91 aaKnown RBP10.65□□□□□ -0.7
TRIM50-203ENST00000488217 FAM24AA6NFZ4 105 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 SNURFLB1AK76 121 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 J3KRW8 73 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 RLN2P04090 185 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 HOXA5P20719 270 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 LEPP41159 167 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 CAV2P51636 162 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 H2BFSP57053 126 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 IL15RAQ13261 267 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 ESRGQ1W209 222 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 MIC13Q5XKP0 118 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 ZNF586Q9NXT0 402 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 WDR83OSQ9Y284 106 aa10.64□□□□□ -0.71
TRIM50-203ENST00000488217 A0A0J9YY99 117 aa10.63□□□□□ -0.71
TRIM50-203ENST00000488217 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
TRIM50-203ENST00000488217 H3BNG1 76 aa10.63□□□□□ -0.71
TRIM50-203ENST00000488217 RPL29P47914 159 aaKnown RBP10.63□□□□□ -0.71
TRIM50-203ENST00000488217 DAZ2Q13117 558 aaKnown RBP10.63□□□□□ -0.71
TRIM50-203ENST00000488217 PFDN5Q99471 154 aa10.63□□□□□ -0.71
TRIM50-203ENST00000488217 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
TRIM50-203ENST00000488217 C11orf1Q9H5F2 150 aa10.63□□□□□ -0.71
TRIM50-203ENST00000488217 UQCC1Q9NVA1 299 aa10.63□□□□□ -0.71
TRIM50-203ENST00000488217 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
TRIM50-203ENST00000488217 PVALBP20472 110 aaPredicted RBP10.62□□□□□ -0.71
TRIM50-203ENST00000488217 S100A11P31949 105 aa10.62□□□□□ -0.71
TRIM50-203ENST00000488217 CYCSP99999 105 aaKnown RBP10.62□□□□□ -0.71
TRIM50-203ENST00000488217 VWC2Q2TAL6 325 aa10.62□□□□□ -0.71
TRIM50-203ENST00000488217 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
TRIM50-203ENST00000488217 NMES1Q9C002 83 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms