RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 FAM167A-AS1Q96KT0 104 aa17.04■□□□□ 0.32
RHBDD3-205ENST00000488106 FUT9Q9Y231 359 aa17.04■□□□□ 0.32
RHBDD3-205ENST00000488106 SMIM9A6NGZ8 99 aa17.03■□□□□ 0.32
RHBDD3-205ENST00000488106 CRXO43186 299 aaPredicted RBP17.03■□□□□ 0.32
RHBDD3-205ENST00000488106 ZNF253O75346 499 aa17.03■□□□□ 0.32
RHBDD3-205ENST00000488106 ZNF767PQ75MW2 155 aa17.03■□□□□ 0.32
RHBDD3-205ENST00000488106 OR10J6PQ8NGY7 276 aa17.03■□□□□ 0.32
RHBDD3-205ENST00000488106 ASB13Q8WXK3 278 aa17.03■□□□□ 0.32
RHBDD3-205ENST00000488106 PARD6GQ9BYG4 376 aaPredicted RBP17.03■□□□□ 0.32
RHBDD3-205ENST00000488106 HYDINQ4G0P3 5121 aa17.02■□□□□ 0.32
RHBDD3-205ENST00000488106 NDUFB4O95168 129 aa17.02■□□□□ 0.32
RHBDD3-205ENST00000488106 HBE1P02100 147 aa17.02■□□□□ 0.32
RHBDD3-205ENST00000488106 OR10J4P0C629 311 aa17.02■□□□□ 0.32
RHBDD3-205ENST00000488106 AQP10Q96PS8 301 aa17.02■□□□□ 0.32
RHBDD3-205ENST00000488106 M0R3E3 92 aa17.01■□□□□ 0.31
RHBDD3-205ENST00000488106 OR7C2O60412 319 aa17.01■□□□□ 0.31
RHBDD3-205ENST00000488106 PDE6HQ13956 83 aa17.01■□□□□ 0.31
RHBDD3-205ENST00000488106 Q6ZTC4 211 aa17.01■□□□□ 0.31
RHBDD3-205ENST00000488106 PAXXQ9BUH6 204 aa17.01■□□□□ 0.31
RHBDD3-205ENST00000488106 OR51M1Q9H341 326 aa17.01■□□□□ 0.31
RHBDD3-205ENST00000488106 FXYD6-FXYD2A0A087WZ82 144 aa17■□□□□ 0.31
RHBDD3-205ENST00000488106 LOC102723971A0A1B0GUV8 181 aa17■□□□□ 0.31
RHBDD3-205ENST00000488106 RRN3P1Q2M238 152 aa17■□□□□ 0.31
RHBDD3-205ENST00000488106 EXOC3-AS1Q8N2X6 119 aa17■□□□□ 0.31
RHBDD3-205ENST00000488106 OR2T35Q8NGX2 323 aa17■□□□□ 0.31
RHBDD3-205ENST00000488106 TMEM189A5PLL7 270 aa16.99■□□□□ 0.31
RHBDD3-205ENST00000488106 EIF3GO75821 320 aaKnown RBP eCLIP16.99■□□□□ 0.31
RHBDD3-205ENST00000488106 RPP25LQ8N5L8 163 aaKnown RBP16.99■□□□□ 0.31
RHBDD3-205ENST00000488106 FXYD5Q96DB9 178 aa16.99■□□□□ 0.31
RHBDD3-205ENST00000488106 AAMDCQ9H7C9 122 aa16.99■□□□□ 0.31
RHBDD3-205ENST00000488106 NBEAP1P0C6P0 100 aa16.98■□□□□ 0.31
RHBDD3-205ENST00000488106 CDKN1BP46527 198 aa16.98■□□□□ 0.31
RHBDD3-205ENST00000488106 ZNF266Q14584 549 aa16.98■□□□□ 0.31
RHBDD3-205ENST00000488106 HSD17B11Q8NBQ5 300 aa16.98■□□□□ 0.31
RHBDD3-205ENST00000488106 INO80EQ8NBZ0 244 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-205ENST00000488106 MRPL53Q96EL3 112 aaKnown RBP16.98■□□□□ 0.31
RHBDD3-205ENST00000488106 ZNF705GA8MUZ8 300 aaPredicted RBP16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 PRM2P04554 102 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 RAB2AP61019 212 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 UBE2L3P68036 154 aaKnown RBP16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 ICAM4Q14773 271 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 C12orf74Q32Q52 190 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 KHDC3LQ587J8 217 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 C2CD4CQ8TF44 421 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 RNF141Q8WVD5 230 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 PHYHIPLQ96FC7 376 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 PRELID1Q9Y255 219 aa16.97■□□□□ 0.31
RHBDD3-205ENST00000488106 C11orf94C9JXX5 98 aa16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 NPIPB6E9PJ23 425 aa16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 J3KRW8 73 aa16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 KIR3DS1Q14943 382 aa16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 ACOT6Q3I5F7 207 aaPredicted RBP16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 FAM122CQ6P4D5 195 aa16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 LINC00476Q8WZB0 136 aa16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 ZNF503Q96F45 646 aa16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 YTHDF2Q9Y5A9 579 aaKnown RBP16.96■□□□□ 0.31
RHBDD3-205ENST00000488106 TRAV10A0A0B4J240 114 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 RNF222A6NCQ9 220 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 SPART-AS1P0CW21 52 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 M6PRP20645 277 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 TAS2R45P59539 299 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 ERCC8Q13216 396 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 FAM222AQ5U5X8 452 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 LINC01587Q99440 93 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 TNFSF18Q9UNG2 199 aa16.95■□□□□ 0.3
RHBDD3-205ENST00000488106 LY6G6CO95867 125 aa16.94■□□□□ 0.3
RHBDD3-205ENST00000488106 CT45A10P0DMU9 189 aa16.94■□□□□ 0.3
RHBDD3-205ENST00000488106 TSPOP30536 169 aa16.94■□□□□ 0.3
RHBDD3-205ENST00000488106 TMEM256Q8N2U0 113 aa16.94■□□□□ 0.3
RHBDD3-205ENST00000488106 DKK2Q9UBU2 259 aa16.94■□□□□ 0.3
RHBDD3-205ENST00000488106 IGKV2-40A0A087WW87 121 aaPredicted RBP16.93■□□□□ 0.3
RHBDD3-205ENST00000488106 IGLL5B9A064 214 aa16.93■□□□□ 0.3
RHBDD3-205ENST00000488106 G3V3Q6 166 aa16.93■□□□□ 0.3
RHBDD3-205ENST00000488106 IGKV2D-40P01614 121 aaPredicted RBP16.93■□□□□ 0.3
RHBDD3-205ENST00000488106 HTN1P15515 57 aa16.93■□□□□ 0.3
RHBDD3-205ENST00000488106 LEPP41159 167 aa16.93■□□□□ 0.3
RHBDD3-205ENST00000488106 GFI1BQ5VTD9 330 aa16.93■□□□□ 0.3
RHBDD3-205ENST00000488106 A0A1W2PPV4 95 aa16.92■□□□□ 0.3
RHBDD3-205ENST00000488106 ATP6V0CP27449 155 aa16.92■□□□□ 0.3
RHBDD3-205ENST00000488106 OR10G4Q8NGN3 311 aa16.92■□□□□ 0.3
RHBDD3-205ENST00000488106 OR10G9Q8NGN4 311 aa16.92■□□□□ 0.3
RHBDD3-205ENST00000488106 OR10G7Q8NGN6 311 aa16.92■□□□□ 0.3
RHBDD3-205ENST00000488106 ODF3Q96PU9 254 aa16.92■□□□□ 0.3
RHBDD3-205ENST00000488106 SH3BGRL3Q9H299 93 aa16.92■□□□□ 0.3
RHBDD3-205ENST00000488106 DEFB131BA0A096LNP1 70 aa16.91■□□□□ 0.3
RHBDD3-205ENST00000488106 TEX48A0A1B0GUV7 120 aa16.91■□□□□ 0.3
RHBDD3-205ENST00000488106 SMLR1H3BR10 107 aa16.91■□□□□ 0.3
RHBDD3-205ENST00000488106 HMGB3O15347 200 aaKnown RBP16.91■□□□□ 0.3
RHBDD3-205ENST00000488106 RANP62826 216 aaKnown RBP16.91■□□□□ 0.3
RHBDD3-205ENST00000488106 NIPSNAP3BQ9BS92 247 aa16.91■□□□□ 0.3
RHBDD3-205ENST00000488106 PLA2G2EQ9NZK7 142 aa16.91■□□□□ 0.3
RHBDD3-205ENST00000488106 AZU1P20160 251 aa16.9■□□□□ 0.3
RHBDD3-205ENST00000488106 RPL7L1Q6DKI1 246 aaKnown RBP16.9■□□□□ 0.3
RHBDD3-205ENST00000488106 OR2G3Q8NGZ4 309 aa16.9■□□□□ 0.3
RHBDD3-205ENST00000488106 PSMG3Q9BT73 122 aaPredicted RBP16.9■□□□□ 0.3
RHBDD3-205ENST00000488106 Q9H3A6 140 aa16.9■□□□□ 0.3
RHBDD3-205ENST00000488106 ARPC5O15511 151 aa16.89■□□□□ 0.29
RHBDD3-205ENST00000488106 CDC34P49427 236 aaPredicted RBP16.89■□□□□ 0.29
RHBDD3-205ENST00000488106 TAS2R60P59551 318 aa16.89■□□□□ 0.29
RHBDD3-205ENST00000488106 AGPAT4-IT1Q9H0P7 198 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms