RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 C8orf49Q96NF6 230 aa12.23□□□□□ -0.45
HLA-DQB1-209ENST00000487676 ASIPP42127 132 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 EIF4EBP1Q13541 118 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 SLC50A1Q9BRV3 221 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 C1QTNF4Q9BXJ3 329 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 SS18L2Q9UHA2 77 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 IGHV4-39P01824 125 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 NEGR1Q7Z3B1 354 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 TNRC6AQ8NDV7 1962 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 C19orf71A6NCJ1 209 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 B5MCH6 92 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 ZNF833PQ6ZTB9 187 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 PRSS22Q9GZN4 317 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 C9JAW5 83 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 TRIP6Q15654 476 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 TMEM200BQ69YZ2 307 aa12.22□□□□□ -0.45
HLA-DQB1-209ENST00000487676 MED12LQ86YW9 2145 aa12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 ZNF688P0C7X2 276 aa12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 ATP1A1-AS1Q5TC04 95 aa12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 SIGLEC9Q9Y336 463 aa12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 DOPEY2Q9Y3R5 2298 aa12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 C17orf100A8MU93 164 aa12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 IGHV3-23P01764 117 aa12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 SPAG8Q99932 426 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-209ENST00000487676 GAGE12JA6NER3 117 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 GAGE7O76087 117 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 GAGE12FP0CL80 117 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 GAGE12GP0CL81 117 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 GAGE12IP0CL82 117 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 ATP5G2Q06055 141 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 GAGE4Q13068 117 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 C2orf91Q6ZV80 131 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 PCDH15Q96QU1 1955 aa12.21□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGHV3OR16-13A0A075B7E8 117 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGHV3-74A0A0B4J1X5 117 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 KLRD1Q13241 179 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 DGAT2L7PQ6IED9 249 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGHV3OR16-8A0A075B7F1 116 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 CD3EP07766 207 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 TMEM155Q4W5P6 130 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 PKDREJQ9NTG1 2253 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGKV3-7A0A075B6H7 116 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 PROP1O75360 226 aa12.2□□□□□ -0.46
HLA-DQB1-209ENST00000487676 TRAV2A0A0B4J234 112 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 F8VRH5 84 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 TTTY13Q9BZ97 58 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 DPM3Q9P2X0 92 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 K7EM74 188 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 GP9P14770 177 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 FOXI1Q12951 378 aa12.19□□□□□ -0.46
HLA-DQB1-209ENST00000487676 NBR2O15453 112 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 KLK10O43240 276 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 EML6Q6ZMW3 1958 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 C1orf210Q8IVY1 113 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 PRR25Q96S07 402 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 PLCE1Q9P212 2302 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 ATXN8Q156A1 80 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 SLC25A15Q9Y619 301 aa12.18□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IFITM1P13164 125 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 ADIPOQQ15848 244 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 CLUHP3Q96NS8 147 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 ZNF71Q9NQZ8 489 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 A0A087WX48 190 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 MLST8Q9BVC4 326 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 GFRALQ6UXV0 394 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 OR11H6Q8NGC7 330 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 SPTAN1Q13813 2472 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 BPTFQ12830 3046 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGHV3-66A0A0C4DH42 116 aa12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB1-209ENST00000487676 UBTD1Q9HAC8 227 aa12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGHV1-8P0DP01 117 aa12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 SLC25A16P16260 332 aa12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 PRADC1Q9BSG0 188 aa12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 FAM27E3Q08E93 113 aa12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 MDS2Q8NDY4 140 aa12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 MUC22E2RYF6 1773 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-209ENST00000487676 SPTBN1Q01082 2364 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 RNF5Q99942 180 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 AKAP6Q13023 2319 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGHV3-49A0A0A0MS15 119 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 HLA-DRB4P13762 266 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 HLA-DRB4X5D2U9 266 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 IGHV1-3A0A0C4DH29 117 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 H3BRN7 92 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 C2orf82Q6UX34 121 aa12.15□□□□□ -0.46
HLA-DQB1-209ENST00000487676 DUX4L9Q6RFH8 374 aaPredicted RBP12.15□□□□□ -0.47
HLA-DQB1-209ENST00000487676 TEN1Q86WV5 123 aa12.15□□□□□ -0.47
HLA-DQB1-209ENST00000487676 ARFGEF3Q5TH69 2177 aa12.15□□□□□ -0.47
HLA-DQB1-209ENST00000487676 FAM74A4Q5TZK3 123 aa12.14□□□□□ -0.47
HLA-DQB1-209ENST00000487676 FDCSPQ8NFU4 85 aa12.14□□□□□ -0.47
HLA-DQB1-209ENST00000487676 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
HLA-DQB1-209ENST00000487676 E9PLD3 99 aa12.14□□□□□ -0.47
HLA-DQB1-209ENST00000487676 K7EMI3 77 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms