RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 APOC4P55056 127 aa14.26□□□□□ -0.13
PCOLCE-208ENST00000487172 DEFB1P60022 68 aa14.26□□□□□ -0.13
PCOLCE-208ENST00000487172 SBSPONQ8IVN8 264 aa14.26□□□□□ -0.13
PCOLCE-208ENST00000487172 RPUSD4Q96CM3 377 aaKnown RBP14.26□□□□□ -0.13
PCOLCE-208ENST00000487172 AGRNO00468 2067 aa14.26□□□□□ -0.13
PCOLCE-208ENST00000487172 MAP1LC3B2A6NCE7 125 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 A8MTW9 85 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 F6UB75 175 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 UBE2CO00762 179 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 DUSP14O95147 198 aaKnown RBP14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 RANP62826 216 aaKnown RBP14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 ICAM4Q14773 271 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 EXOC3-AS1Q8N2X6 119 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 FAM213BQ8TBF2 198 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 MAP1LC3BQ9GZQ8 125 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 Q9H3A6 140 aa14.25□□□□□ -0.13
PCOLCE-208ENST00000487172 ZNF705FA8MVS1 300 aaPredicted RBP14.24□□□□□ -0.13
PCOLCE-208ENST00000487172 MORN3Q6PF18 240 aaPredicted RBP14.24□□□□□ -0.13
PCOLCE-208ENST00000487172 OR8A1Q8NGG7 326 aa14.24□□□□□ -0.13
PCOLCE-208ENST00000487172 CSTL1Q9H114 145 aa14.24□□□□□ -0.13
PCOLCE-208ENST00000487172 BOLA2-SMG1P6H3BVE0 249 aa14.23□□□□□ -0.13
PCOLCE-208ENST00000487172 M0R3E3 92 aa14.23□□□□□ -0.13
PCOLCE-208ENST00000487172 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
PCOLCE-208ENST00000487172 ARL6IP6Q8N6S5 226 aa14.23□□□□□ -0.13
PCOLCE-208ENST00000487172 OTORQ9NRC9 128 aa14.23□□□□□ -0.13
PCOLCE-208ENST00000487172 PRAC2D3DTV9 90 aa14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 H2AFB1P0C5Y9 115 aa14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 FGF8P55075 233 aaPredicted RBP14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 NUTF2P61970 127 aaKnown RBP14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 FAM74A1Q5RGS3 127 aa14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 ASCL2Q99929 193 aa14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 TM2D3Q9BRN9 247 aa14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 TMPRSS5Q9H3S3 457 aa14.22□□□□□ -0.13
PCOLCE-208ENST00000487172 A0A1W2PRE2 83 aa14.21□□□□□ -0.13
PCOLCE-208ENST00000487172 PGPA6NDG6 321 aa14.21□□□□□ -0.13
PCOLCE-208ENST00000487172 CNN1P51911 297 aaKnown RBP14.21□□□□□ -0.13
PCOLCE-208ENST00000487172 Q6ZWC4 215 aa14.21□□□□□ -0.13
PCOLCE-208ENST00000487172 OR4B1Q8NGF8 309 aa14.21□□□□□ -0.13
PCOLCE-208ENST00000487172 RXFP4Q8TDU9 374 aa14.21□□□□□ -0.13
PCOLCE-208ENST00000487172 SFT2D1Q8WV19 159 aa14.21□□□□□ -0.13
PCOLCE-208ENST00000487172 TRAV1-1A0A0B4J248 108 aa14.2□□□□□ -0.14
PCOLCE-208ENST00000487172 CSN1S1P47710 185 aa14.2□□□□□ -0.14
PCOLCE-208ENST00000487172 HIST1H1AQ02539 215 aaPredicted RBP14.2□□□□□ -0.14
PCOLCE-208ENST00000487172 IQCF2Q8IXL9 164 aa14.2□□□□□ -0.14
PCOLCE-208ENST00000487172 OR10J6PQ8NGY7 276 aa14.2□□□□□ -0.14
PCOLCE-208ENST00000487172 GIG44P09565 113 aaPredicted RBP14.19□□□□□ -0.14
PCOLCE-208ENST00000487172 ZNF705DP0CH99 300 aaPredicted RBP14.19□□□□□ -0.14
PCOLCE-208ENST00000487172 ZNF705BP0CI00 300 aaPredicted RBP14.19□□□□□ -0.14
PCOLCE-208ENST00000487172 AMTNQ6UX39 209 aa14.19□□□□□ -0.14
PCOLCE-208ENST00000487172 ALKAL2Q6UX46 152 aa14.19□□□□□ -0.14
PCOLCE-208ENST00000487172 SPATA25Q9BR10 227 aa14.19□□□□□ -0.14
PCOLCE-208ENST00000487172 NPIPB6E9PJ23 425 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 CA1P00915 261 aaPredicted RBP14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 IGKV3-20P01619 116 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 C9orf47Q6ZRZ4 202 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 CMTM2Q8TAZ6 248 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 C1QTNF4Q9BXJ3 329 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 NKX6-2Q9C056 277 aaPredicted RBP14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 ZMAT4Q9H898 229 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 ARL2-SNX15V9GYD0 113 aa14.18□□□□□ -0.14
PCOLCE-208ENST00000487172 RBAKDNA6NC62 111 aa14.17□□□□□ -0.14
PCOLCE-208ENST00000487172 TEX46H3BTG2 121 aa14.17□□□□□ -0.14
PCOLCE-208ENST00000487172 HBE1P02100 147 aa14.17□□□□□ -0.14
PCOLCE-208ENST00000487172 SLC25A5P05141 298 aaKnown RBP14.17□□□□□ -0.14
PCOLCE-208ENST00000487172 SUMO1P63165 101 aaKnown RBP14.17□□□□□ -0.14
PCOLCE-208ENST00000487172 LINC00477Q96M19 166 aa14.17□□□□□ -0.14
PCOLCE-208ENST00000487172 PRKDCP78527 4128 aaKnown RBP14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 FAM74A7A6NL05 159 aa14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 DIRC3C9JPN6 131 aa14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 PRB4P10163 310 aaPredicted RBP14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 PPT1P50897 306 aa14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 C5orf17Q8NAS9 161 aa14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 RNF183Q96D59 192 aa14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 ODF3Q96PU9 254 aa14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 SLC35B3Q9H1N7 401 aa14.16□□□□□ -0.14
PCOLCE-208ENST00000487172 ZNF705EA8MWA4 302 aaPredicted RBP14.15□□□□□ -0.14
PCOLCE-208ENST00000487172 GGTLC3B5MD39 225 aa14.15□□□□□ -0.14
PCOLCE-208ENST00000487172 AMBPP02760 352 aa14.15□□□□□ -0.14
PCOLCE-208ENST00000487172 CSNK1G2-AS1Q8NCQ2 148 aa14.15□□□□□ -0.14
PCOLCE-208ENST00000487172 AGPAT4-IT1Q9H0P7 198 aa14.15□□□□□ -0.14
PCOLCE-208ENST00000487172 YTHDF2Q9Y5A9 579 aaKnown RBP14.15□□□□□ -0.14
PCOLCE-208ENST00000487172 SERTM2A0A1B0GWG4 89 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 SPRY2O43597 315 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 UBE2G2P60604 165 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 BLOC1S1P78537 153 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 PMS2P11Q13670 270 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 DEFB135Q30KP9 77 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 RCHY1Q96PM5 261 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 OVOL2Q9BRP0 275 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 PPP1R14DQ9NXH3 145 aa14.14□□□□□ -0.15
PCOLCE-208ENST00000487172 IGKV2-40A0A087WW87 121 aaPredicted RBP14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 IGKV2D-40P01614 121 aaPredicted RBP14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 CT45A10P0DMU9 189 aa14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 TEX261Q6UWH6 196 aa14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 CCDC28AQ8IWP9 274 aa14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 VGLL1Q99990 258 aa14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 XCL2Q9UBD3 114 aa14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 EPDR1Q9UM22 224 aa14.13□□□□□ -0.15
PCOLCE-208ENST00000487172 A0A1B0GV50 99 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms