RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 FXYD7P58549 80 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 LRRK2Q5S007 2527 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 COL4A3Q01955 1670 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 TRGV1A0A0A0MS02 117 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 A0A1B0GW64 132 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-241ENST00000487169 PCP4P48539 62 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 CFAP161Q6P656 301 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 NDUFA4L2Q9NRX3 87 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 TEX36Q5VZQ5 186 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 DEFB104AQ8WTQ1 72 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 EML6Q6ZMW3 1958 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 TMEM190Q8WZ59 177 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 SHANK2-AS3Q9BTD1 123 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 NDUFAF3Q9BU61 184 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-241ENST00000487169 IGKV1-39P01597 117 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 IGKV1D-39P04432 117 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 CD28P10747 220 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 ZNF134P52741 427 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 DEFB131AP59861 70 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 HIST1H2BLQ99880 126 aa10.75□□□□□ -0.69
HDLBP-241ENST00000487169 IGHV3-73A0A0B4J1V6 119 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 D6R8Y8 96 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 PSG3Q16557 428 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 C3orf56Q8N813 242 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 FN1P02751 2386 aaKnown RBP10.74□□□□□ -0.69
HDLBP-241ENST00000487169 A0A0U1RRA0 63 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 DPM2O94777 84 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 DMRTC2Q8IXT2 367 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-241ENST00000487169 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 DEFB121Q5J5C9 76 aa10.74□□□□□ -0.69
HDLBP-241ENST00000487169 FAM110DQ8TAY7 271 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-241ENST00000487169 WIPF3A6NGB9 483 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 C15orf65H3BRN8 121 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 PAX9P55771 341 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 LINC00311Q8N616 119 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 ANAPC10Q9UM13 185 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 SH2D1AO60880 128 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 IGLV3-1P01715 115 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 MALP21145 153 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
HDLBP-241ENST00000487169 WT1-ASQ06250 92 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 ZNF415Q09FC8 603 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 IGFL2Q6UWQ7 119 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-241ENST00000487169 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
HDLBP-241ENST00000487169 CHD3Q12873 2000 aaKnown RBP10.73□□□□□ -0.69
HDLBP-241ENST00000487169 KIF26AQ9ULI4 1882 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-241ENST00000487169 TRBV7-9A0A0J9YWB2 115 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 SCGB1A1P11684 91 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
HDLBP-241ENST00000487169 DKK1O94907 266 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 PDE6HQ13956 83 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 C1QTNF4Q9BXJ3 329 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 KAAG1Q9UBP8 84 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 DKK4Q9UBT3 224 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 LY96Q9Y6Y9 160 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 TRAV9-2A0A087WT02 112 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 C22orf46C9J442 243 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-241ENST00000487169 DIAPH2-AS1Q14236 149 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-241ENST00000487169 TPSG1Q9NRR2 321 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 C5orf42Q9H799 3197 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 SFTA2Q6UW10 78 aa10.72□□□□□ -0.69
HDLBP-241ENST00000487169 OR9G4Q8NGQ1 327 aa10.71□□□□□ -0.69
HDLBP-241ENST00000487169 CHCHD1Q96BP2 118 aaKnown RBP10.71□□□□□ -0.69
HDLBP-241ENST00000487169 LAMTOR2Q9Y2Q5 125 aa10.71□□□□□ -0.69
HDLBP-241ENST00000487169 RNF138Q8WVD3 245 aa10.71□□□□□ -0.69
HDLBP-241ENST00000487169 PLA2G2EQ9NZK7 142 aa10.71□□□□□ -0.69
HDLBP-241ENST00000487169 PCDH15Q96QU1 1955 aa10.71□□□□□ -0.7
HDLBP-241ENST00000487169 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.7
HDLBP-241ENST00000487169 DPH3P1Q9H4G8 78 aa10.71□□□□□ -0.7
HDLBP-241ENST00000487169 Q71RC1 249 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-241ENST00000487169 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
HDLBP-241ENST00000487169 ARMS2P0C7Q2 107 aa10.7□□□□□ -0.7
HDLBP-241ENST00000487169 TMEM256Q8N2U0 113 aa10.7□□□□□ -0.7
HDLBP-241ENST00000487169 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
HDLBP-241ENST00000487169 AMBPP02760 352 aa10.7□□□□□ -0.7
HDLBP-241ENST00000487169 ERCC8Q13216 396 aa10.7□□□□□ -0.7
HDLBP-241ENST00000487169 NHP2Q9NX24 153 aaKnown RBP10.7□□□□□ -0.7
HDLBP-241ENST00000487169 TYMSP04818 313 aa10.7□□□□□ -0.7
HDLBP-241ENST00000487169 LINC01549A6NIU2 74 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 CRPP02741 224 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 LAGE3Q14657 143 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 DTX2Q86UW9 622 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 SHISA9B4DS77 424 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 ZNF664Q8N3J9 261 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
HDLBP-241ENST00000487169 CHD7Q9P2D1 2997 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 IGHV3-64A0A075B6Q5 118 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 A0A1W2PNU3 283 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-241ENST00000487169 INSP01308 110 aa10.69□□□□□ -0.7
HDLBP-241ENST00000487169 DEFB130BP0DP73 79 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms