RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 FGF7P21781 194 aa13.5□□□□□ -0.25
CLIP2-206ENST00000487091 ZNF493Q6ZR52 646 aa13.5□□□□□ -0.25
CLIP2-206ENST00000487091 C16orf74Q96GX8 76 aa13.5□□□□□ -0.25
CLIP2-206ENST00000487091 NMES1Q9C002 83 aa13.5□□□□□ -0.25
CLIP2-206ENST00000487091 PTTG2Q9NZH5 202 aa13.5□□□□□ -0.25
CLIP2-206ENST00000487091 H7BYZ3 331 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 PRB4P10163 310 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-206ENST00000487091 IFITM3Q01628 133 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 RNF212Q495C1 297 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 TMEM88Q6PEY1 159 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 LINC00336Q6ZUF6 198 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 SLC25A31Q9H0C2 315 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 ZNF586Q9NXT0 402 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
CLIP2-206ENST00000487091 E5RGE8 158 aa13.48□□□□□ -0.25
CLIP2-206ENST00000487091 SIX6O95475 246 aa13.48□□□□□ -0.25
CLIP2-206ENST00000487091 CYCSP99999 105 aaKnown RBP13.48□□□□□ -0.25
CLIP2-206ENST00000487091 NHLH2Q02577 135 aa13.48□□□□□ -0.25
CLIP2-206ENST00000487091 C15orf53Q8NAA6 179 aa13.48□□□□□ -0.25
CLIP2-206ENST00000487091 MRPL53Q96EL3 112 aaKnown RBP13.48□□□□□ -0.25
CLIP2-206ENST00000487091 ODF3Q96PU9 254 aa13.48□□□□□ -0.25
CLIP2-206ENST00000487091 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
CLIP2-206ENST00000487091 TIMM8BQ9Y5J9 83 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-206ENST00000487091 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
CLIP2-206ENST00000487091 INMT-MINDY4F8WBC2 141 aa13.47□□□□□ -0.25
CLIP2-206ENST00000487091 DEFB130BP0DP73 79 aa13.47□□□□□ -0.25
CLIP2-206ENST00000487091 DEFB130AP0DP74 79 aa13.47□□□□□ -0.25
CLIP2-206ENST00000487091 HIST1H1EP10412 219 aaKnown RBP13.47□□□□□ -0.25
CLIP2-206ENST00000487091 HTN1P15515 57 aa13.47□□□□□ -0.25
CLIP2-206ENST00000487091 LGALS9BQ3B8N2 356 aa13.47□□□□□ -0.25
CLIP2-206ENST00000487091 UBE2DNLQ8IWF7 75 aa13.47□□□□□ -0.25
CLIP2-206ENST00000487091 CBY3A6NI87 242 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 NPIPB6E9PJ23 425 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 PDE6HQ13956 83 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 KIR3DS1Q14943 382 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 FCN2Q15485 313 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 OR5C1Q8NGR4 320 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
CLIP2-206ENST00000487091 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
CLIP2-206ENST00000487091 MARVELD1Q9BSK0 173 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 PARD6GQ9BYG4 376 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-206ENST00000487091 OR5AC2Q9NZP5 309 aa13.46□□□□□ -0.25
CLIP2-206ENST00000487091 ATP5G1P05496 136 aa13.45□□□□□ -0.26
CLIP2-206ENST00000487091 CT45A10P0DMU9 189 aa13.45□□□□□ -0.26
CLIP2-206ENST00000487091 LEPP41159 167 aa13.45□□□□□ -0.26
CLIP2-206ENST00000487091 ATP5G3P48201 142 aa13.45□□□□□ -0.26
CLIP2-206ENST00000487091 GFI1BQ5VTD9 330 aa13.45□□□□□ -0.26
CLIP2-206ENST00000487091 PRELID1Q9Y255 219 aa13.45□□□□□ -0.26
CLIP2-206ENST00000487091 H0YIZ8 118 aa13.44□□□□□ -0.26
CLIP2-206ENST00000487091 NDUFB4O95168 129 aa13.44□□□□□ -0.26
CLIP2-206ENST00000487091 LRRC37A5PQ49AS3 106 aa13.44□□□□□ -0.26
CLIP2-206ENST00000487091 CCDC28AQ8IWP9 274 aa13.44□□□□□ -0.26
CLIP2-206ENST00000487091 THAP6Q8TBB0 222 aa13.44□□□□□ -0.26
CLIP2-206ENST00000487091 F5H768 121 aa13.43□□□□□ -0.26
CLIP2-206ENST00000487091 M0R2N4 97 aa13.43□□□□□ -0.26
CLIP2-206ENST00000487091 FAM3BP58499 235 aaPredicted RBP13.43□□□□□ -0.26
CLIP2-206ENST00000487091 GCSAMLQ5JQS6 135 aa13.43□□□□□ -0.26
CLIP2-206ENST00000487091 NOP10Q9NPE3 64 aaKnown RBP13.43□□□□□ -0.26
CLIP2-206ENST00000487091 KCNIP2Q9NS61 270 aa13.43□□□□□ -0.26
CLIP2-206ENST00000487091 TIMM9Q9Y5J7 89 aa13.43□□□□□ -0.26
CLIP2-206ENST00000487091 NACAE9PAV3 2078 aa13.43□□□□□ -0.26
CLIP2-206ENST00000487091 M0R3E3 92 aa13.42□□□□□ -0.26
CLIP2-206ENST00000487091 PYYP10082 97 aa13.42□□□□□ -0.26
CLIP2-206ENST00000487091 H2BFSP57053 126 aa13.42□□□□□ -0.26
CLIP2-206ENST00000487091 DEFA1P59665 94 aa13.42□□□□□ -0.26
CLIP2-206ENST00000487091 DEFA3P59666 94 aa13.42□□□□□ -0.26
CLIP2-206ENST00000487091 CLINT1Q14677 625 aa13.42□□□□□ -0.26
CLIP2-206ENST00000487091 WDR61Q9GZS3 305 aaKnown RBP13.42□□□□□ -0.26
CLIP2-206ENST00000487091 Q6ZR54 194 aa13.41□□□□□ -0.26
CLIP2-206ENST00000487091 PPP1R1CQ8WVI7 109 aa13.41□□□□□ -0.26
CLIP2-206ENST00000487091 FAM167A-AS1Q96KT0 104 aa13.41□□□□□ -0.26
CLIP2-206ENST00000487091 LINC00477Q96M19 166 aa13.41□□□□□ -0.26
CLIP2-206ENST00000487091 PYGO2Q9BRQ0 406 aa13.41□□□□□ -0.26
CLIP2-206ENST00000487091 SLC25A2Q9BXI2 301 aa13.41□□□□□ -0.26
CLIP2-206ENST00000487091 HECTD4Q9Y4D8 3996 aa13.4□□□□□ -0.26
CLIP2-206ENST00000487091 IGLV2-18A0A075B6J9 118 aa13.4□□□□□ -0.26
CLIP2-206ENST00000487091 J3KRW8 73 aa13.4□□□□□ -0.26
CLIP2-206ENST00000487091 RTL8CO15255 209 aa13.4□□□□□ -0.26
CLIP2-206ENST00000487091 SLC25A5P05141 298 aaKnown RBP13.4□□□□□ -0.26
CLIP2-206ENST00000487091 LINC00612Q8N6U2 182 aa13.4□□□□□ -0.26
CLIP2-206ENST00000487091 BLNKQ8WV28 456 aa13.4□□□□□ -0.26
CLIP2-206ENST00000487091 MRPL32Q9BYC8 188 aaKnown RBP13.4□□□□□ -0.26
CLIP2-206ENST00000487091 AAMDCQ9H7C9 122 aa13.4□□□□□ -0.26
CLIP2-206ENST00000487091 TRAV12-3A0A0B4J271 114 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 C17orf112F2Z3M2 114 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 NBEAP1P0C6P0 100 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 ERCC8Q13216 396 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 MIR17HGQ75NE6 70 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 FAM19A4Q96LR4 140 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 AGPAT4-IT1Q9H0P7 198 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 OR51M1Q9H341 326 aa13.39□□□□□ -0.27
CLIP2-206ENST00000487091 DNAH2Q9P225 4427 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 C7orf71A4D174 169 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 KLLNB2CW77 178 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 SSNA1O43805 119 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 PET100P0DJ07 73 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 C9orf47Q6ZRZ4 202 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 EXOC3-AS1Q8N2X6 119 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 ATP5SQ99766 215 aa13.38□□□□□ -0.27
CLIP2-206ENST00000487091 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms