RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 F6UB75 175 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 EIF3GO75821 320 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC00996-202ENST00000486954 IGKV3-20P01619 116 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 CSN1S1P47710 185 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 DEFB1P60022 68 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 ICAM4Q14773 271 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 DEFB135Q30KP9 77 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 GDF5OSQ5U4N7 250 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 DPPA3Q6W0C5 159 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 Q6ZWC4 215 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 OR8A1Q8NGG7 326 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 ZNF503Q96F45 646 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 PHYHIPLQ96FC7 376 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 RCHY1Q96PM5 261 aa8.59□□□□□ -1.03
LINC00996-202ENST00000486954 MAP1LC3B2A6NCE7 125 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 NDUFB4O95168 129 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 GCHFRP30047 84 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 CNN1P51911 297 aaKnown RBP8.58□□□□□ -1.04
LINC00996-202ENST00000486954 RANP62826 216 aaKnown RBP8.58□□□□□ -1.04
LINC00996-202ENST00000486954 EXOC3-AS1Q8N2X6 119 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 CMTM2Q8TAZ6 248 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 FAM213BQ8TBF2 198 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 TMED6Q8WW62 240 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 MAP1LC3BQ9GZQ8 125 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 Q9H3A6 140 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 U3KQK5 164 aa8.58□□□□□ -1.04
LINC00996-202ENST00000486954 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
LINC00996-202ENST00000486954 SPRY2O43597 315 aa8.57□□□□□ -1.04
LINC00996-202ENST00000486954 AMBPP02760 352 aa8.57□□□□□ -1.04
LINC00996-202ENST00000486954 RAB5CP51148 216 aa8.57□□□□□ -1.04
LINC00996-202ENST00000486954 RXFP4Q8TDU9 374 aa8.57□□□□□ -1.04
LINC00996-202ENST00000486954 RETNQ9HD89 108 aa8.57□□□□□ -1.04
LINC00996-202ENST00000486954 OTORQ9NRC9 128 aa8.57□□□□□ -1.04
LINC00996-202ENST00000486954 AGRNO00468 2067 aa8.57□□□□□ -1.04
LINC00996-202ENST00000486954 TEX46H3BTG2 121 aa8.56□□□□□ -1.04
LINC00996-202ENST00000486954 BOLA2-SMG1P6H3BVE0 249 aa8.56□□□□□ -1.04
LINC00996-202ENST00000486954 M0R3E3 92 aa8.56□□□□□ -1.04
LINC00996-202ENST00000486954 ZNF705DP0CH99 300 aaPredicted RBP8.56□□□□□ -1.04
LINC00996-202ENST00000486954 ZNF705BP0CI00 300 aaPredicted RBP8.56□□□□□ -1.04
LINC00996-202ENST00000486954 NKX2-5P52952 324 aaPredicted RBP8.56□□□□□ -1.04
LINC00996-202ENST00000486954 ZNF726P1Q15940 193 aa8.56□□□□□ -1.04
LINC00996-202ENST00000486954 RNF183Q96D59 192 aa8.56□□□□□ -1.04
LINC00996-202ENST00000486954 RPH3ALQ9UNE2 315 aa8.56□□□□□ -1.04
LINC00996-202ENST00000486954 PGPA6NDG6 321 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 A8MTW9 85 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 TSPOP30536 169 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 FGF8P55075 233 aaPredicted RBP8.55□□□□□ -1.04
LINC00996-202ENST00000486954 FXYD7P58549 80 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 TMEM78Q5T7P6 136 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 SSX7Q7RTT5 188 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 OVOL2Q9BRP0 275 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 SLC35B3Q9H1N7 401 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
LINC00996-202ENST00000486954 PRAC2D3DTV9 90 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 INSP01308 110 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 SLC25A5P05141 298 aaKnown RBP8.54□□□□□ -1.04
LINC00996-202ENST00000486954 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 PRB4P10163 310 aaPredicted RBP8.54□□□□□ -1.04
LINC00996-202ENST00000486954 LEPP41159 167 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 FHITP49789 147 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 SPINK13Q1W4C9 94 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 SFT2D1Q8WV19 159 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 RARRES2Q99969 163 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 GOLT1BQ9Y3E0 138 aa8.54□□□□□ -1.04
LINC00996-202ENST00000486954 IGKV2-40A0A087WW87 121 aaPredicted RBP8.53□□□□□ -1.04
LINC00996-202ENST00000486954 SERTM2A0A1B0GWG4 89 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 A0A1W2PRE2 83 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 RBAKDNA6NC62 111 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 NPIPB6E9PJ23 425 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 K7EQM0 130 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 M0R2Z0 102 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 IGKV2D-40P01614 121 aaPredicted RBP8.53□□□□□ -1.04
LINC00996-202ENST00000486954 CDKN1BP46527 198 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 SULT1A2P50226 295 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 PPT1P50897 306 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 AMTNQ6UX39 209 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 C5orf17Q8NAS9 161 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 OR11H2Q8NH07 326 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 LINC00477Q96M19 166 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 ODF3Q96PU9 254 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 TMEM208Q9BTX3 173 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
LINC00996-202ENST00000486954 PRKDCP78527 4128 aaKnown RBP8.53□□□□□ -1.04
LINC00996-202ENST00000486954 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
LINC00996-202ENST00000486954 IGHV3OR16-12A0A075B7B8 117 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 A0A1B0GV50 99 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 DIRC3C9JPN6 131 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 HBE1P02100 147 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 UBE2G2P60604 165 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 ARL6IP6Q8N6S5 226 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 MBD3L1Q8WWY6 194 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 IGF2BP2-AS1Q96M15 143 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 TMPRSS5Q9H3S3 457 aa8.52□□□□□ -1.05
LINC00996-202ENST00000486954 IFNA7P01567 189 aa8.51□□□□□ -1.05
LINC00996-202ENST00000486954 GIG44P09565 113 aaPredicted RBP8.51□□□□□ -1.05
LINC00996-202ENST00000486954 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms