RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 IGHV3OR16-8A0A075B7F1 116 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 TRAV8-2A0A0B4J237 113 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 IZUMO1RA6ND01 250 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 P01737 135 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 MT-ND6P03923 174 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 TRGC2P03986 189 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 FOXA3P55318 350 aaPredicted RBP8.87□□□□□ -0.99
PRKCB-207ENST00000486868 SRSF2Q01130 221 aaKnown RBP8.87□□□□□ -0.99
PRKCB-207ENST00000486868 LCNL1Q6ZST4 164 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 IL17RELQ6ZVW7 336 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 PRNTQ86SH4 94 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 GBGT1Q8N5D6 347 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 KLHDC1Q8N7A1 406 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 RHPN1-AS1Q9BWJ2 59 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 RPP21Q9H633 154 aaKnown RBP8.87□□□□□ -0.99
PRKCB-207ENST00000486868 LENEPQ9Y5L5 61 aa8.87□□□□□ -0.99
PRKCB-207ENST00000486868 UNC79Q9P2D8 2635 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 TRAV8-1A0A0A6YYK1 113 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 FAM181BA6NEQ2 426 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 C5orf52A6NGY3 159 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 SOCS3O14543 225 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 ZNF207O43670 478 aaKnown RBP8.86□□□□□ -0.99
PRKCB-207ENST00000486868 S100A6P06703 90 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 HILS1P60008 231 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 WDR73Q6P4I2 378 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 ATP5L2Q7Z4Y8 100 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 NHLRC2Q8NBF2 726 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 C4orf3Q8WVX3 66 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 PRR25Q96S07 402 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 GNB1LQ9BYB4 327 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 NRN1Q9NPD7 142 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 NAT8BQ9UHF3 227 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 PDZD2O15018 2839 aa8.86□□□□□ -0.99
PRKCB-207ENST00000486868 TRBV7-9A0A0J9YWB2 115 aa8.85□□□□□ -0.99
PRKCB-207ENST00000486868 OVOL1O14753 267 aa8.85□□□□□ -0.99
PRKCB-207ENST00000486868 NDUFA7O95182 113 aa8.85□□□□□ -0.99
PRKCB-207ENST00000486868 CT45A10P0DMU9 189 aa8.85□□□□□ -0.99
PRKCB-207ENST00000486868 SRD5A1P18405 259 aa8.85□□□□□ -0.99
PRKCB-207ENST00000486868 KLF5Q13887 457 aaPredicted RBP8.85□□□□□ -0.99
PRKCB-207ENST00000486868 NDFIP1Q9BT67 221 aa8.85□□□□□ -0.99
PRKCB-207ENST00000486868 ESM1Q9NQ30 184 aa8.85□□□□□ -0.99
PRKCB-207ENST00000486868 IGHV3-66A0A0C4DH42 116 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 TMEM213A2RRL7 107 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 TM4SF20Q53R12 229 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 COA6Q5JTJ3 125 aaKnown RBP8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-207ENST00000486868 Q6AWC8 147 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 LINC00322Q6ZN03 302 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-207ENST00000486868 ZFP82Q8N141 532 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 CCDC168Q8NDH2 2452 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BHQ93079 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 ZC2HC1AQ96GY0 325 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 C16orf92Q96LL3 132 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 SGK494Q96LW2 274 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 LINC00477Q96M19 166 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BNQ99877 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 HIST1H2BMQ99879 126 aa8.84□□□□□ -0.99
PRKCB-207ENST00000486868 ITPR3Q14573 2671 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 IGHV3OR16-13A0A075B7E8 117 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 IGHV3-74A0A0B4J1X5 117 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 XKRY2A2RUG3 117 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 LINC01619G3V211 115 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 UBE2CO00762 179 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 TRGC1P0CF51 173 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 ID1P41134 155 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 RPS20P60866 119 aaKnown RBP8.83□□□□□ -1
PRKCB-207ENST00000486868 SMUG1Q53HV7 270 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 FAM162BQ5T6X4 162 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 PRR27Q6MZM9 219 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 FRZBQ92765 325 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 DUX5Q96PT3 197 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 TRAPPC1Q9Y5R8 145 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 CSMD2Q7Z408 3487 aa8.83□□□□□ -1
PRKCB-207ENST00000486868 NBPF19A0A087WUL8 3843 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 IGHV4OR15-8A0A075B7B6 117 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 A0A087WW49 117 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 IGKV2-40A0A087WW87 121 aaPredicted RBP8.82□□□□□ -1
PRKCB-207ENST00000486868 IGHV3-49A0A0A0MS15 119 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 TRAV2A0A0B4J234 112 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 LY6G6DO95868 133 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 IGKV2D-40P01614 121 aaPredicted RBP8.82□□□□□ -1
PRKCB-207ENST00000486868 HLA-DQA1P01909 254 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 HOXA5P20719 270 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 HLA-DMBP28068 263 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 HOXD3P31249 432 aaPredicted RBP8.82□□□□□ -1
PRKCB-207ENST00000486868 ZNF138P52744 262 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 RBPMS2Q6ZRY4 209 aaKnown RBP8.82□□□□□ -1
PRKCB-207ENST00000486868 TCF24Q7RTU0 167 aa8.82□□□□□ -1
PRKCB-207ENST00000486868 NUP35Q8NFH5 326 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms