RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
CLDN11-206ENST00000486429 ATP5SQ99766 215 aa13.09□□□□□ -0.31
CLDN11-206ENST00000486429 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
CLDN11-206ENST00000486429 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
CLDN11-206ENST00000486429 CDKN1BP46527 198 aa13.08□□□□□ -0.32
CLDN11-206ENST00000486429 TMEM256Q8N2U0 113 aa13.08□□□□□ -0.32
CLDN11-206ENST00000486429 MBD2Q9UBB5 411 aa13.08□□□□□ -0.32
CLDN11-206ENST00000486429 HSPB11Q9Y547 144 aa13.08□□□□□ -0.32
CLDN11-206ENST00000486429 ALG5Q9Y673 324 aa13.08□□□□□ -0.32
CLDN11-206ENST00000486429 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
CLDN11-206ENST00000486429 ZNF705GA8MUZ8 300 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-206ENST00000486429 PRAC2D3DTV9 90 aa13.07□□□□□ -0.32
CLDN11-206ENST00000486429 C17orf112F2Z3M2 114 aa13.07□□□□□ -0.32
CLDN11-206ENST00000486429 PYYP10082 97 aa13.07□□□□□ -0.32
CLDN11-206ENST00000486429 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
CLDN11-206ENST00000486429 RPP25LQ8N5L8 163 aaKnown RBP13.07□□□□□ -0.32
CLDN11-206ENST00000486429 RPL12P30050 165 aaKnown RBP13.06□□□□□ -0.32
CLDN11-206ENST00000486429 TSPOP30536 169 aa13.06□□□□□ -0.32
CLDN11-206ENST00000486429 PDE6HQ13956 83 aa13.06□□□□□ -0.32
CLDN11-206ENST00000486429 MIR17HGQ75NE6 70 aa13.06□□□□□ -0.32
CLDN11-206ENST00000486429 MRPL53Q96EL3 112 aaKnown RBP13.06□□□□□ -0.32
CLDN11-206ENST00000486429 SLC25A2Q9BXI2 301 aa13.06□□□□□ -0.32
CLDN11-206ENST00000486429 MRPL32Q9BYC8 188 aaKnown RBP13.06□□□□□ -0.32
CLDN11-206ENST00000486429 TIMM9Q9Y5J7 89 aa13.06□□□□□ -0.32
CLDN11-206ENST00000486429 OXA1LQ15070 435 aa13.05□□□□□ -0.32
CLDN11-206ENST00000486429 LINC01587Q99440 93 aa13.05□□□□□ -0.32
CLDN11-206ENST00000486429 NDUFAF3Q9BU61 184 aa13.05□□□□□ -0.32
CLDN11-206ENST00000486429 PARD6GQ9BYG4 376 aaPredicted RBP13.05□□□□□ -0.32
CLDN11-206ENST00000486429 SMIM3Q9BZL3 60 aa13.05□□□□□ -0.32
CLDN11-206ENST00000486429 VPS13DQ5THJ4 4388 aa13.05□□□□□ -0.32
CLDN11-206ENST00000486429 EPPK1P58107 5090 aaKnown RBP13.05□□□□□ -0.32
CLDN11-206ENST00000486429 NPIPB6E9PJ23 425 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 IFNA5P01569 189 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 TAS2R60P59551 318 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 DAD1P61803 113 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 BLNKQ8WV28 456 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 ODF3Q96PU9 254 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 C20orf144Q9BQM9 153 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
CLDN11-206ENST00000486429 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 M0R3E3 92 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 NDUFB4O95168 129 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 PRM2P04554 102 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 HTN3P15516 51 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 LEPP41159 167 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 GFI1BQ5VTD9 330 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 SCGB1C1Q8TD33 95 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 AAMDCQ9H7C9 122 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 FUT9Q9Y231 359 aa13.03□□□□□ -0.32
CLDN11-206ENST00000486429 H7BYZ3 331 aa13.02□□□□□ -0.33
CLDN11-206ENST00000486429 FFAR4Q5NUL3 377 aa13.02□□□□□ -0.33
CLDN11-206ENST00000486429 C16orf74Q96GX8 76 aa13.02□□□□□ -0.33
CLDN11-206ENST00000486429 CT45A10P0DMU9 189 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 HTN1P15515 57 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 AZU1P20160 251 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 KIR3DS1Q14943 382 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 EXOC3-AS1Q8N2X6 119 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 FAM210BQ96KR6 192 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 MED28Q9H204 178 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 OR51M1Q9H341 326 aa13.01□□□□□ -0.33
CLDN11-206ENST00000486429 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
CLDN11-206ENST00000486429 PLAC8L1A1L4L8 177 aa13□□□□□ -0.33
CLDN11-206ENST00000486429 J3KRW8 73 aa13□□□□□ -0.33
CLDN11-206ENST00000486429 OR7C2O60412 319 aa13□□□□□ -0.33
CLDN11-206ENST00000486429 OR10J4P0C629 311 aa13□□□□□ -0.33
CLDN11-206ENST00000486429 NBEAP1P0C6P0 100 aa13□□□□□ -0.33
CLDN11-206ENST00000486429 ICAM4Q14773 271 aa13□□□□□ -0.33
CLDN11-206ENST00000486429 KMT2AQ03164 3969 aa12.99□□□□□ -0.33
CLDN11-206ENST00000486429 DEFB130BP0DP73 79 aa12.99□□□□□ -0.33
CLDN11-206ENST00000486429 DEFB130AP0DP74 79 aa12.99□□□□□ -0.33
CLDN11-206ENST00000486429 UBE2L3P68036 154 aaKnown RBP12.99□□□□□ -0.33
CLDN11-206ENST00000486429 FCN2Q15485 313 aa12.99□□□□□ -0.33
CLDN11-206ENST00000486429 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
CLDN11-206ENST00000486429 TMEM263Q8WUH6 116 aaKnown RBP12.99□□□□□ -0.33
CLDN11-206ENST00000486429 FXYD5Q96DB9 178 aa12.99□□□□□ -0.33
CLDN11-206ENST00000486429 P0DMU3 169 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 FAM231AP0DMU4 169 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 FAM231CP0DMU5 169 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 ERCC8Q13216 396 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 KHDC3LQ587J8 217 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 RNASE8Q8TDE3 154 aaKnown RBP12.98□□□□□ -0.33
CLDN11-206ENST00000486429 RNF141Q8WVD5 230 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 PHYHIPLQ96FC7 376 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 WFDC1Q9HC57 220 aa12.98□□□□□ -0.33
CLDN11-206ENST00000486429 TRAV12-3A0A0B4J271 114 aa12.97□□□□□ -0.33
CLDN11-206ENST00000486429 TAS2R45P59539 299 aa12.97□□□□□ -0.33
CLDN11-206ENST00000486429 CCDC28AQ8IWP9 274 aa12.97□□□□□ -0.33
CLDN11-206ENST00000486429 LINC00477Q96M19 166 aa12.97□□□□□ -0.33
CLDN11-206ENST00000486429 TIMM8BQ9Y5J9 83 aaPredicted RBP12.97□□□□□ -0.33
CLDN11-206ENST00000486429 BIRC6Q9NR09 4857 aa12.96□□□□□ -0.33
CLDN11-206ENST00000486429 IGKV2-40A0A087WW87 121 aaPredicted RBP12.96□□□□□ -0.33
CLDN11-206ENST00000486429 IGKV2D-40P01614 121 aaPredicted RBP12.96□□□□□ -0.33
CLDN11-206ENST00000486429 SLC25A5P05141 298 aaKnown RBP12.96□□□□□ -0.33
CLDN11-206ENST00000486429 TMEM78Q5T7P6 136 aa12.96□□□□□ -0.33
CLDN11-206ENST00000486429 TMEM88Q6PEY1 159 aa12.96□□□□□ -0.33
CLDN11-206ENST00000486429 C7orf71A4D174 169 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms