RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 HOPXQ9BPY8 73 aaPredicted RBP0.3□□□□□ -2.36
LTN1-206ENST00000486427 RTL8AQ9BWD3 113 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 KRTAP2-4Q9BYR9 128 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 KRTAP2-1Q9BYU5 128 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 NIT2Q9NQR4 276 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 PLAC8Q9NZF1 115 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 RNF11Q9Y3C5 154 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 PTPRDP23468 1912 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 TMEM238C9JI98 176 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 G0S2P27469 103 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 GLRXP35754 106 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 LTC4SQ16873 150 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 FOXI2Q6ZQN5 318 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 PBDC1Q9BVG4 233 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 STOML2Q9UJZ1 356 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 UFC1Q9Y3C8 167 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 ANKRD31Q8N7Z5 1873 aa0.29□□□□□ -2.36
LTN1-206ENST00000486427 ZGRF1Q86YA3 2104 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 ADGBQ8N7X0 1667 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 TRBV30A0A0K0K1B3 111 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 LYRM1O43325 122 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 PPP1R2P41236 205 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 CRYBA4P53673 196 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 HBBP68871 147 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 MIR22HGQ0VDD5 57 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 FKBP1CQ5VVH2 108 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 PPP1R2P3Q6NXS1 205 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 TMED4Q7Z7H5 227 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 FAM216BQ8N7L0 139 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 OR2H1Q9GZK4 316 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 GID8Q9NWU2 228 aa0.28□□□□□ -2.36
LTN1-206ENST00000486427 NUP210Q8TEM1 1887 aaPredicted RBP0.27□□□□□ -2.37
LTN1-206ENST00000486427 NUPR2A6NF83 97 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 GPR31O00270 319 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 GNG10P50151 68 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 FXYD4P59646 89 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 POU6F1Q14863 301 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 RTL8BQ17RB0 113 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 LINC00299Q6ZSB3 139 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 LINC00269Q8N2A0 174 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 PLEKHB2Q96CS7 222 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 LIMD2Q9BT23 127 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 TAF9BQ9HBM6 251 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 OTORQ9NRC9 128 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 RTL9Q8NET4 1388 aa0.27□□□□□ -2.37
LTN1-206ENST00000486427 TANC2Q9HCD6 1990 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 ZNF727A8MUV8 499 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 RPL35P42766 123 aaKnown RBP0.26□□□□□ -2.37
LTN1-206ENST00000486427 OCIAD2Q56VL3 154 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 Q6ZS92 163 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 ANGPTL5Q86XS5 388 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 NEK7Q8TDX7 302 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 DYDC1Q8WWB3 177 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 BORCS8Q96FH0 119 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 CST11Q9H112 138 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 MED11Q9P086 117 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 TECPR2O15040 1411 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 SYNMO15061 1565 aa0.26□□□□□ -2.37
LTN1-206ENST00000486427 ASH1LQ9NR48 2969 aaKnown RBP0.25□□□□□ -2.37
LTN1-206ENST00000486427 ZDBF2Q9HCK1 2354 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 SPTBP11277 2137 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 KIAA1107Q9UPP5 1409 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 A0A096LPI6 279 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 A0A0J9YY99 117 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 H7BYZ3 331 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 CST7O76096 145 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 MT-ND6P03923 174 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 CCL4P13236 92 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 SERPINB1P30740 379 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 SPINT3P49223 89 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 ZNF137PP52743 207 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 TCTAP57738 103 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 SPINK7P58062 85 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 C3orf33Q6P1S2 294 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 Q6ZQY7 126 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 ZCCHC23Q6ZST2 131 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 STX19Q8N4C7 294 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 FAM24BQ8N5W8 94 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 FAM103A1Q9BTL3 118 aaKnown RBP0.25□□□□□ -2.37
LTN1-206ENST00000486427 BOLA2Q9H3K6 86 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 LRTM1Q9HBL6 345 aa0.25□□□□□ -2.37
LTN1-206ENST00000486427 NAV3Q8IVL0 2385 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 TRDV1A0A1B0GX56 115 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 MAP1LC3B2A6NCE7 125 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 H3BQV1 296 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 PDE6GP18545 87 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 DIAPH2-AS1Q14236 149 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 VMA21Q3ZAQ7 101 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 C6orf52Q5T4I8 152 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 TRIQKQ629K1 86 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 DCUN1D2Q6PH85 259 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 PRR15Q8IV56 129 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 CCL4L1Q8NHW4 92 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 BIN3Q9NQY0 253 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 IL20Q9NYY1 176 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 NAT8BQ9UHF3 227 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 JPT1Q9UK76 154 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 NUBP2Q9Y5Y2 271 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 APCP25054 2843 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 ANK1P16157 1881 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms