RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 KIR2DL5BQ8NHK3 375 aa12.92□□□□□ -0.34
MCF2L-226ENST00000486210 SAT2Q96F10 170 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-226ENST00000486210 C20orf173Q96LM9 149 aa12.92□□□□□ -0.34
MCF2L-226ENST00000486210 HRH4Q9H3N8 390 aa12.92□□□□□ -0.34
MCF2L-226ENST00000486210 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
MCF2L-226ENST00000486210 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
MCF2L-226ENST00000486210 DEFB131AP59861 70 aa12.91□□□□□ -0.34
MCF2L-226ENST00000486210 APRG1Q8IVJ8 170 aa12.91□□□□□ -0.34
MCF2L-226ENST00000486210 BLNKQ8WV28 456 aa12.91□□□□□ -0.34
MCF2L-226ENST00000486210 RNF141Q8WVD5 230 aa12.91□□□□□ -0.34
MCF2L-226ENST00000486210 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
MCF2L-226ENST00000486210 TRBV19A0A075B6N1 114 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 CTXND1A0A1B0GTU2 59 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 NDUFB4O95168 129 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
MCF2L-226ENST00000486210 MEOX2P50222 304 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 DEFB1P60022 68 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 FAM74A1Q5RGS3 127 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 FAM213BQ8TBF2 198 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 LINC00052Q96N35 136 aa12.9□□□□□ -0.34
MCF2L-226ENST00000486210 KLK5Q9Y337 293 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-226ENST00000486210 UMAD1C9J7I0 102 aa12.89□□□□□ -0.35
MCF2L-226ENST00000486210 NBEAP1P0C6P0 100 aa12.89□□□□□ -0.35
MCF2L-226ENST00000486210 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-226ENST00000486210 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-226ENST00000486210 UBE2L3P68036 154 aaKnown RBP12.89□□□□□ -0.35
MCF2L-226ENST00000486210 PSMG4Q5JS54 123 aa12.89□□□□□ -0.35
MCF2L-226ENST00000486210 LCN15Q6UWW0 184 aa12.89□□□□□ -0.35
MCF2L-226ENST00000486210 ALKAL2Q6UX46 152 aa12.89□□□□□ -0.35
MCF2L-226ENST00000486210 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
MCF2L-226ENST00000486210 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
MCF2L-226ENST00000486210 ZNF331Q9NQX6 463 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-226ENST00000486210 ISLRO14498 428 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 ID1P41134 155 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 PSMB3P49720 205 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 SULT1A2P50226 295 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 GUK1Q16774 197 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
MCF2L-226ENST00000486210 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 RNF183Q96D59 192 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 PHYHIPLQ96FC7 376 aa12.88□□□□□ -0.35
MCF2L-226ENST00000486210 GCHFRP30047 84 aa12.87□□□□□ -0.35
MCF2L-226ENST00000486210 SNRPD3P62318 126 aaKnown RBP12.87□□□□□ -0.35
MCF2L-226ENST00000486210 SLC50A1Q9BRV3 221 aa12.87□□□□□ -0.35
MCF2L-226ENST00000486210 TMPRSS5Q9H3S3 457 aa12.87□□□□□ -0.35
MCF2L-226ENST00000486210 MAP1LC3B2A6NCE7 125 aa12.86□□□□□ -0.35
MCF2L-226ENST00000486210 KNCNA6PVL3 124 aa12.86□□□□□ -0.35
MCF2L-226ENST00000486210 CXorf1O96002 111 aa12.86□□□□□ -0.35
MCF2L-226ENST00000486210 SAMD13Q5VXD3 122 aa12.86□□□□□ -0.35
MCF2L-226ENST00000486210 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
MCF2L-226ENST00000486210 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
MCF2L-226ENST00000486210 MAP1LC3BQ9GZQ8 125 aa12.86□□□□□ -0.35
MCF2L-226ENST00000486210 F6UB75 175 aa12.85□□□□□ -0.35
MCF2L-226ENST00000486210 ZNF253O75346 499 aa12.85□□□□□ -0.35
MCF2L-226ENST00000486210 PDE6HQ13956 83 aa12.85□□□□□ -0.35
MCF2L-226ENST00000486210 PSG3Q16557 428 aa12.85□□□□□ -0.35
MCF2L-226ENST00000486210 GDF5OSQ5U4N7 250 aa12.85□□□□□ -0.35
MCF2L-226ENST00000486210 EXOC3-AS1Q8N2X6 119 aa12.85□□□□□ -0.35
MCF2L-226ENST00000486210 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
MCF2L-226ENST00000486210 FAT2Q9NYQ8 4349 aa12.84□□□□□ -0.35
MCF2L-226ENST00000486210 A0A1B0GV50 99 aa12.84□□□□□ -0.35
MCF2L-226ENST00000486210 ZNF705FA8MVS1 300 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-226ENST00000486210 RAB5CP51148 216 aa12.84□□□□□ -0.35
MCF2L-226ENST00000486210 RANP62826 216 aaKnown RBP12.84□□□□□ -0.35
MCF2L-226ENST00000486210 IQCF2Q8IXL9 164 aa12.84□□□□□ -0.35
MCF2L-226ENST00000486210 SFT2D1Q8WV19 159 aa12.84□□□□□ -0.35
MCF2L-226ENST00000486210 PHLDA1Q8WV24 401 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-226ENST00000486210 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
MCF2L-226ENST00000486210 DNAH2Q9P225 4427 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 M0R3E3 92 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 H2AFB1P0C5Y9 115 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 PSG9Q00887 426 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 ICAM4Q14773 271 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 Q9H3A6 140 aa12.83□□□□□ -0.36
MCF2L-226ENST00000486210 ZNF705DP0CH99 300 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-226ENST00000486210 ZNF705BP0CI00 300 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-226ENST00000486210 ACTL10Q5JWF8 245 aa12.82□□□□□ -0.36
MCF2L-226ENST00000486210 SAV1Q9H4B6 383 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-226ENST00000486210 TMEM167BQ9NRX6 74 aa12.82□□□□□ -0.36
MCF2L-226ENST00000486210 ABCA13Q86UQ4 5058 aa12.81□□□□□ -0.36
MCF2L-226ENST00000486210 ZNF705EA8MWA4 302 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-226ENST00000486210 CCL20P78556 96 aa12.81□□□□□ -0.36
MCF2L-226ENST00000486210 FOXI2Q6ZQN5 318 aa12.81□□□□□ -0.36
MCF2L-226ENST00000486210 RPUSD4Q96CM3 377 aaKnown RBP12.81□□□□□ -0.36
MCF2L-226ENST00000486210 RARRES2Q99969 163 aa12.81□□□□□ -0.36
MCF2L-226ENST00000486210 DYNC1H1Q14204 4646 aaKnown RBP12.8□□□□□ -0.36
MCF2L-226ENST00000486210 A0A0J9YX75 114 aa12.8□□□□□ -0.36
MCF2L-226ENST00000486210 PGPA6NDG6 321 aa12.8□□□□□ -0.36
MCF2L-226ENST00000486210 H3BMM0 161 aa12.8□□□□□ -0.36
MCF2L-226ENST00000486210 UBE2G2P60604 165 aa12.8□□□□□ -0.36
MCF2L-226ENST00000486210 TEX261Q6UWH6 196 aa12.8□□□□□ -0.36
MCF2L-226ENST00000486210 YTHDF2Q9Y5A9 579 aaKnown RBP12.8□□□□□ -0.36
MCF2L-226ENST00000486210 HLA-DRB4P13762 266 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 TRPT1Q86TN4 253 aaKnown RBP12.79□□□□□ -0.36
MCF2L-226ENST00000486210 STHQ8IWL8 128 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 LYPD1Q8N2G4 141 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms