RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 NUP35Q8NFH5 326 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 KIF26BQ2KJY2 2108 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 PATJQ8NI35 1801 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 I3L3M4 83 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 TAL2Q16559 108 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 DKK4Q9UBT3 224 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 J3QRE1 110 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 PI4KAP42356 2102 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 TMEM242Q9NWH2 141 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 NEGR1Q7Z3B1 354 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 IGF2BP2-AS1Q96M15 143 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 CREBBPQ92793 2442 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 DMRTC2Q8IXT2 367 aaPredicted RBP8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 TRPM7Q96QT4 1865 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 LMO1P25800 156 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 Q86TA4 180 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 AMN1Q8IY45 258 aa8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 PDCD11Q14690 1871 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-207ENST00000485983 GAGE2BQ13066 116 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 FGF16O43320 207 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 LOC285556D6RIA3 1793 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 TEX48A0A1B0GUV7 120 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 GUSBP1Q15486 140 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 ANXA2RQ3ZCQ2 193 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 PFN1P07737 140 aaKnown RBP8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
SRGAP3-207ENST00000485983 IGKV2D-24A0A075B6R9 120 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 MLANAQ16655 118 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 CACNA1HO95180 2353 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 WNK2Q9Y3S1 2297 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 BDP1A6H8Y1 2624 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 FANCMQ8IYD8 2048 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 A0A1B0GUS0 222 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 PRSS29PA6NIE9 313 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 CHAC1Q9BUX1 264 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 TRBV24-1A0A075B6N3 115 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 C9orf66Q5T8R8 295 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 Q6ZS49 121 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 SBF1O95248 1867 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 NXPH4O95158 308 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 LINC00205P59089 165 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 OCIAD2Q56VL3 154 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 SMIM2Q9BVW6 85 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 IGKV1OR2-108A0A075B7D4 117 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 TRAV25A0A0B4J276 109 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 PCP4P48539 62 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 FOXL2NBQ6ZUU3 175 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 GFI1Q99684 422 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
SRGAP3-207ENST00000485983 BTCP35070 178 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 GAGE2AQ6NT46 116 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 TMEM256Q8N2U0 113 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 PKDREJQ9NTG1 2253 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 SOCS3O14543 225 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 DEFB113Q30KQ7 82 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 C8orf86Q6ZUL3 223 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 SIGMAR1Q99720 223 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 DOCK4Q8N1I0 1966 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 A0A096LPF7 62 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 C5orf63A6NC05 138 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 DOCK6Q96HP0 2047 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 GFRA4Q9GZZ7 299 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BKO60814 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BJP06899 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BOP23527 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BBP33778 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BDP58876 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BCP62807 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST2H2BEQ16778 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BHQ93079 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BNQ99877 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 HIST1H2BMQ99879 126 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 VPREB3Q9UKI3 123 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 FER1L5A0AVI2 2057 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 NOTCH2Q04721 2471 aa8.48□□□□□ -1.05
SRGAP3-207ENST00000485983 PRR31Q5SQ13 230 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 NCOR1P1Q9H4R4 102 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 CHD5Q8TDI0 1954 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 WISP1O95388 367 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 NDUFAF3Q9BU61 184 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 CCL24O00175 119 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 LOXP28300 417 aaPredicted RBP8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 CCL18P55774 89 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 SRSF3P84103 164 aaKnown RBP8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 ZNRD1Q9P1U0 126 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 HLA-DRB4P13762 266 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms