RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 JTBO76095 146 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 VDAC1P21796 283 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 VDAC2P45880 294 aaPredicted RBP3.98□□□□□ -1.77
CCDC39-205ENST00000485055 KLRD1Q13241 179 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 MORN2Q502X0 79 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 CLEC19AQ6UXS0 136 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 Q6ZRU5 148 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 Q6ZSN1 163 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF555Q8NEP9 628 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 NPBQ8NG41 125 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 H1FXQ92522 213 aaKnown RBP3.98□□□□□ -1.77
CCDC39-205ENST00000485055 DUSP21Q9H596 190 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 TAF9BQ9HBM6 251 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 ANAPC10Q9UM13 185 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 TEX48A0A1B0GUV7 120 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 WI2-2373I1.2A0A1W2PRP0 233 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 K7EQD1 137 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 YPEL1O60688 119 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 LALBAP00709 142 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 CA2P00918 260 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 HLA-DRB1P01911 266 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 CD2P06729 351 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 RBMY1FQ15415 496 aaKnown RBP3.98□□□□□ -1.77
CCDC39-205ENST00000485055 HMGN3Q15651 99 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 COL5A1-AS1Q5SY13 56 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 PRSS54Q6PEW0 395 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 UNQ9165/PRO28630Q6UXU0 137 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 LINC00337Q8N6G1 96 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 SYT8Q8NBV8 401 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 OR5A1Q8NGJ0 315 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 FAM3DQ96BQ1 224 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 YPEL2Q96QA6 119 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 SLC25A33Q9BSK2 321 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF286AQ9HBT8 521 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 MOB4Q9Y3A3 225 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 PLXNB1O43157 2135 aa3.98□□□□□ -1.77
CCDC39-205ENST00000485055 TMEM30CPA0ZSE6 113 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 ANGPTL7O43827 346 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 UCHL1P09936 223 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 CCL3L1P16619 93 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 MYL9P24844 172 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 BATFQ16520 125 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 LINC00242Q5T6M2 205 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 MOB1BQ7L9L4 216 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 LRRTM1Q86UE6 522 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 TCTE3Q8IZS6 198 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 C5orf56Q8N8D9 126 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 OR10J6PQ8NGY7 276 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 GALNT14Q96FL9 552 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 IGF2BP2-AS1Q96M15 143 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 DERL3Q96Q80 235 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 GNB4Q9HAV0 340 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 MAP1AP78559 2803 aaPredicted RBP3.97□□□□□ -1.77
CCDC39-205ENST00000485055 C1orf196B1AJZ1 125 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 NDUFA3O95167 84 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 NAPSAO96009 420 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 TSHBP01222 138 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 IGLC6P0CF74 106 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 FCGR2CP31995 323 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 MORN5Q5VZ52 161 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF833PQ6ZTB9 187 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.97□□□□□ -1.77
CCDC39-205ENST00000485055 OR10AC1Q8NH08 325 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 SMIM8Q96KF7 97 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 CNBD2Q96M20 576 aa3.97□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF436Q9C0F3 470 aaPredicted RBP3.97□□□□□ -1.77
CCDC39-205ENST00000485055 TMEM14DPA8MWL7 114 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 J3QLW9 94 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF19P17023 458 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 RBMXP38159 391 aaKnown RBP3.96□□□□□ -1.77
CCDC39-205ENST00000485055 THBS3P49746 956 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 FABP5Q01469 135 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 ZNF493Q6ZR52 646 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 SUMF2Q8NBJ7 301 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 MGLLQ99685 303 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 TLN2Q9Y4G6 2542 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 ATRQ13535 2644 aa3.96□□□□□ -1.77
CCDC39-205ENST00000485055 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 TRAV1-2A0A0B4J238 106 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 H3BUA1 57 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 M0R129 80 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 IL3RAP26951 378 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 PRR3P79522 188 aaKnown RBP3.96□□□□□ -1.78
CCDC39-205ENST00000485055 TRAV8-3A0A0A6YYJ7 113 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 PIN1P1O15428 100 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 MAS1P04201 325 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 PI3P19957 117 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 PPP1CCP36873 323 aaKnown RBP3.96□□□□□ -1.78
CCDC39-205ENST00000485055 GABARAPL2P60520 117 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 HERV-K104P61576 105 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 PSG9Q00887 426 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 FABP9Q0Z7S8 132 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 C6orf99Q4VX62 202 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 ABCA11PQ4W5N1 156 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 OR11H7Q8NGC8 314 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 CST11Q9H112 138 aa3.96□□□□□ -1.78
CCDC39-205ENST00000485055 TENM1Q9UKZ4 2725 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 TRRAPQ9Y4A5 3859 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 A0A0J9YXV3 536 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 CCDC179H3BU77 68 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms