RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 H3BQ15 152 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 SMLR1H3BR10 107 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 M6PRP20645 277 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 CNN1P51911 297 aaKnown RBP7.23□□□□□ -1.25
CPSF4-213ENST00000484112 KHDC3LQ587J8 217 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 FFAR4Q5NUL3 377 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 LYPD1Q8N2G4 141 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 OR11H4Q8NGC9 324 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 RPUSD4Q96CM3 377 aaKnown RBP7.23□□□□□ -1.25
CPSF4-213ENST00000484112 GNPNAT1Q96EK6 184 aaPredicted RBP7.23□□□□□ -1.25
CPSF4-213ENST00000484112 SLC25A2Q9BXI2 301 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 OR51M1Q9H341 326 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 AAMDCQ9H7C9 122 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 WFDC1Q9HC57 220 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 APLNQ9ULZ1 77 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 FXYD6-FXYD2A0A087WZ82 144 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 A0A1W2PPV4 95 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 TMEM189A5PLL7 270 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 RNF222A6NCQ9 220 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 TCTAP57738 103 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 ZNF345Q14585 488 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 Q5BKY6 102 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 GCSAMLQ5JQS6 135 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 AMTNQ6UX39 209 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 ZNF705AQ6ZN79 300 aaPredicted RBP7.22□□□□□ -1.25
CPSF4-213ENST00000484112 PQLC2Q6ZP29 291 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 RNF182Q8N6D2 247 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 OR10J6PQ8NGY7 276 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 FAM167A-AS1Q96KT0 104 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 ODF3Q96PU9 254 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 ZNF586Q9NXT0 402 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 GOLT1BQ9Y3E0 138 aa7.22□□□□□ -1.25
CPSF4-213ENST00000484112 ZNF705FA8MVS1 300 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-213ENST00000484112 F6UB75 175 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 NBEAP1P0C6P0 100 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 ZNF705DP0CH99 300 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-213ENST00000484112 ZNF705BP0CI00 300 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-213ENST00000484112 LGALSLQ3ZCW2 172 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-213ENST00000484112 IGFL4Q6B9Z1 124 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 MIR17HGQ75NE6 70 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 TMEM256Q8N2U0 113 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 ARL6IP6Q8N6S5 226 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 Q8NAQ8 132 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 IGF2BP2-AS1Q96M15 143 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 C20orf144Q9BQM9 153 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 PAXXQ9BUH6 204 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 XCL2Q9UBD3 114 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 BOLA1Q9Y3E2 137 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 X6R8D5 127 aa7.21□□□□□ -1.26
CPSF4-213ENST00000484112 AGRNO00468 2067 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 TEX48A0A1B0GUV7 120 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 C11orf94C9JXX5 98 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 SLC17A3O00476 420 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 OR7C2O60412 319 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 NDUFB4O95168 129 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 INSP01308 110 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 PYYP10082 97 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 ATP6V0CP27449 155 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 TSPOP30536 169 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 CDKN1BP46527 198 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 HIST1H1AQ02539 215 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-213ENST00000484112 NDUFA5Q16718 116 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 LINC00336Q6ZUF6 198 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 ZNF767PQ75MW2 155 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 OR10G4Q8NGN3 311 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 OR10G9Q8NGN4 311 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 OR10G7Q8NGN6 311 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 RNF141Q8WVD5 230 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 SLC35B3Q9H1N7 401 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 PPP1R14DQ9NXH3 145 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
CPSF4-213ENST00000484112 A0A0D9SG52 128 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 TRBV7-9A0A0J9YWB2 115 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 NPIPB6E9PJ23 425 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 ARPC5O15511 151 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 NMBP08949 121 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 MED14OSP0DP75 135 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 DEFB1P60022 68 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 UBE2L3P68036 154 aaKnown RBP7.19□□□□□ -1.26
CPSF4-213ENST00000484112 FAM74A1Q5RGS3 127 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 HSD17B11Q8NBQ5 300 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 RXFP4Q8TDU9 374 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 LINC00477Q96M19 166 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 RFNGQ9Y644 331 aa7.19□□□□□ -1.26
CPSF4-213ENST00000484112 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 IGHV4-4A0A075B6R2 117 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 IGHV4-28A0A0C4DH34 117 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 RBAKDNA6NC62 111 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 PRSS29PA6NIE9 313 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 HBE1P02100 147 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 SLC25A5P05141 298 aaKnown RBP7.18□□□□□ -1.26
CPSF4-213ENST00000484112 STAG3L2P0CL84 134 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 STAG3L3P0CL85 134 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 HLA-DMBP28068 263 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 LEPP41159 167 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 CSN1S1P47710 185 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 CDC34P49427 236 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms