RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 RICTORQ6R327 1708 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 B4DSR2 109 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 M0R233 179 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 DNAL4O96015 105 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 CXCL1P09341 107 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 ARPP19P56211 112 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 S100A12P80511 92 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 CDK6Q00534 326 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 SPCS2Q15005 226 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 CGREF1Q99674 301 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 CTTNBP2Q8WZ74 1663 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 SAMD9Q5K651 1589 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 RALGAPBQ86X10 1494 aa2.01□□□□□ -2.09
MCF2-207ENST00000483690 LAMB4A4D0S4 1761 aa2□□□□□ -2.09
MCF2-207ENST00000483690 ANKRD30AQ9BXX3 1397 aa2□□□□□ -2.09
MCF2-207ENST00000483690 MYO3AQ8NEV4 1616 aa2□□□□□ -2.09
MCF2-207ENST00000483690 G0S2P27469 103 aa2□□□□□ -2.09
MCF2-207ENST00000483690 ALX1Q15699 326 aa2□□□□□ -2.09
MCF2-207ENST00000483690 ZNF833PQ6ZTB9 187 aa2□□□□□ -2.09
MCF2-207ENST00000483690 STX19Q8N4C7 294 aa2□□□□□ -2.09
MCF2-207ENST00000483690 NUP35Q8NFH5 326 aa2□□□□□ -2.09
MCF2-207ENST00000483690 POP5Q969H6 163 aaKnown RBP2□□□□□ -2.09
MCF2-207ENST00000483690 SYNMO15061 1565 aa2□□□□□ -2.09
MCF2-207ENST00000483690 UGGT1Q9NYU2 1555 aa2□□□□□ -2.09
MCF2-207ENST00000483690 ARHGAP35Q9NRY4 1499 aa2□□□□□ -2.09
MCF2-207ENST00000483690 MLH3Q9UHC1 1453 aa2□□□□□ -2.09
MCF2-207ENST00000483690 KIF14Q15058 1648 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 CFAP74Q9C0B2 1584 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 LOC105371267A0A1B0GV96 52 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 ERC2-IT1O76042 136 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 GNG10P50151 68 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 RAB5CP51148 216 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 C1orf134Q5TEV5 83 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 GRINAQ7Z429 371 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 LZICQ8WZA0 190 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 CHCHD1Q96BP2 118 aaKnown RBP1.99□□□□□ -2.09
MCF2-207ENST00000483690 MUCL1Q96DR8 90 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 BOLA2Q9H3K6 86 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 CACYBPQ9HB71 228 aaKnown RBP1.99□□□□□ -2.09
MCF2-207ENST00000483690 BIN3Q9NQY0 253 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 A2MP01023 1474 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 NLRP1Q9C000 1473 aa1.99□□□□□ -2.09
MCF2-207ENST00000483690 DIP2CQ9Y2E4 1556 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 PRDM15P57071 1507 aaPredicted RBP1.98□□□□□ -2.09
MCF2-207ENST00000483690 ATP7AQ04656 1500 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 SUPT6HQ7KZ85 1726 aaKnown RBP1.98□□□□□ -2.09
MCF2-207ENST00000483690 MYH3P11055 1940 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 IFNA4P05014 189 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 HMGN1P05114 100 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 CCDC153Q494R4 210 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 TRIQKQ629K1 86 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 C3orf33Q6P1S2 294 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 NEK7Q8TDX7 302 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 RAB37Q96AX2 223 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 LINC00052Q96N35 136 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 TMEM14CQ9P0S9 112 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 PAIP2BQ9ULR5 123 aaKnown RBP1.98□□□□□ -2.09
MCF2-207ENST00000483690 IQGAP1P46940 1657 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 ZNF142P52746 1687 aaPredicted RBP1.98□□□□□ -2.09
MCF2-207ENST00000483690 PLXNA4Q9HCM2 1894 aa1.98□□□□□ -2.09
MCF2-207ENST00000483690 CEP350Q5VT06 3117 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 LRRIQ1Q96JM4 1722 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 CAMSAP2Q08AD1 1489 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 IGHV1-58A0A0C4DH39 117 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 CSN2P05814 226 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 S100A1P23297 94 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 SPRNQ5BIV9 151 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 ZNF431Q8TF32 576 aaPredicted RBP1.97□□□□□ -2.09
MCF2-207ENST00000483690 MRPL40Q9NQ50 206 aaKnown RBP1.97□□□□□ -2.09
MCF2-207ENST00000483690 DEPDC5O75140 1603 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 UNC13BO14795 1591 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 KDM5CP41229 1560 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 ROCK2O75116 1388 aaKnown RBP1.97□□□□□ -2.09
MCF2-207ENST00000483690 CPDO75976 1380 aa1.97□□□□□ -2.09
MCF2-207ENST00000483690 ABCC3O15438 1527 aa1.96□□□□□ -2.09
MCF2-207ENST00000483690 ARHGAP5Q13017 1502 aa1.96□□□□□ -2.09
MCF2-207ENST00000483690 MAP3K1Q13233 1512 aa1.96□□□□□ -2.09
MCF2-207ENST00000483690 SHPRHQ149N8 1683 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 NCOA2Q15596 1464 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 ABCA6Q8N139 1617 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 TRAV5A0A0B4J249 113 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 ODAMA1E959 279 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 NUPR1O60356 82 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 IGLV1-51P01701 117 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 SERPINB1P30740 379 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 CRYBA4P53673 196 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 MSMO1Q15800 293 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 CROCCP2Q86T23 111 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 PLEKHB2Q96CS7 222 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 RTL8AQ9BWD3 113 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 MAP1LC3BQ9GZQ8 125 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 DISP2A7MBM2 1401 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 TROQ12816 1431 aaPredicted RBP1.96□□□□□ -2.1
MCF2-207ENST00000483690 POLR1AO95602 1720 aaPredicted RBP1.96□□□□□ -2.1
MCF2-207ENST00000483690 TMEM2Q9UHN6 1383 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 MROH2AA6NES4 1674 aa1.96□□□□□ -2.1
MCF2-207ENST00000483690 CLTCQ00610 1675 aaKnown RBP1.96□□□□□ -2.1
MCF2-207ENST00000483690 PZPP20742 1482 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 NKTRP30414 1462 aaKnown RBP1.95□□□□□ -2.1
MCF2-207ENST00000483690 CCDC171Q6TFL3 1326 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms