RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
RPP40-206ENST00000483546 TCTE3Q8IZS6 198 aa11.36□□□□□ -0.59
RPP40-206ENST00000483546 OR10J6PQ8NGY7 276 aa11.36□□□□□ -0.59
RPP40-206ENST00000483546 BLNKQ8WV28 456 aa11.36□□□□□ -0.59
RPP40-206ENST00000483546 XCL2Q9UBD3 114 aa11.36□□□□□ -0.59
RPP40-206ENST00000483546 FAM122CQ6P4D5 195 aa11.35□□□□□ -0.59
RPP40-206ENST00000483546 OR11H4Q8NGC9 324 aa11.35□□□□□ -0.59
RPP40-206ENST00000483546 ST6GAL2Q96JF0 529 aa11.35□□□□□ -0.59
RPP40-206ENST00000483546 NEU1Q99519 415 aa11.35□□□□□ -0.59
RPP40-206ENST00000483546 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
RPP40-206ENST00000483546 PPP1R14DQ9NXH3 145 aa11.35□□□□□ -0.59
RPP40-206ENST00000483546 RFNGQ9Y644 331 aa11.35□□□□□ -0.59
RPP40-206ENST00000483546 A0A0J9YWU9 116 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 KANTRA0A1W2PQU2 76 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 BOLA2-SMG1P6H3BVE0 249 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 OR10J4P0C629 311 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 ZNF705AQ6ZN79 300 aaPredicted RBP11.34□□□□□ -0.59
RPP40-206ENST00000483546 RPP25LQ8N5L8 163 aaKnown RBP11.34□□□□□ -0.59
RPP40-206ENST00000483546 ZNF503Q96F45 646 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 IGF2BP2-AS1Q96M15 143 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 ODF3Q96PU9 254 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 CYTL1Q9NRR1 136 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
RPP40-206ENST00000483546 ZNF705FA8MVS1 300 aaPredicted RBP11.33□□□□□ -0.6
RPP40-206ENST00000483546 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
RPP40-206ENST00000483546 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
RPP40-206ENST00000483546 TSPOP30536 169 aa11.33□□□□□ -0.6
RPP40-206ENST00000483546 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
RPP40-206ENST00000483546 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
RPP40-206ENST00000483546 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 BCL2L11O43521 198 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 INSP01308 110 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 ZNF705DP0CH99 300 aaPredicted RBP11.32□□□□□ -0.6
RPP40-206ENST00000483546 ZNF705BP0CI00 300 aaPredicted RBP11.32□□□□□ -0.6
RPP40-206ENST00000483546 FXYD7P58549 80 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 ICAM4Q14773 271 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 FAM74A1Q5RGS3 127 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 Q8NAQ8 132 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 RAB24Q969Q5 203 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 PHYHIPLQ96FC7 376 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 X6R8D5 127 aa11.32□□□□□ -0.6
RPP40-206ENST00000483546 M0R3E3 92 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 CDKN1BP46527 198 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 CSN1S1P47710 185 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 SPINK13Q1W4C9 94 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 AKAP14Q86UN6 197 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 EXOC3-AS1Q8N2X6 119 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 RXFP4Q8TDU9 374 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 C20orf144Q9BQM9 153 aa11.31□□□□□ -0.6
RPP40-206ENST00000483546 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 PRAC2D3DTV9 90 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 PFDN1O60925 122 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 CXorf1O96002 111 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 C1QBP02746 253 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 RANP62826 216 aaKnown RBP11.3□□□□□ -0.6
RPP40-206ENST00000483546 TMEM256Q8N2U0 113 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 HYLS1Q96M11 299 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 Q9H3A6 140 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 TMEM167BQ9NRX6 74 aa11.3□□□□□ -0.6
RPP40-206ENST00000483546 IGHV4-28A0A0C4DH34 117 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 RBAKDNA6NC62 111 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 M0R2Z0 102 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
RPP40-206ENST00000483546 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
RPP40-206ENST00000483546 SEC11BP0C7V7 166 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 LEPP41159 167 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 C9orf47Q6ZRZ4 202 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 TMUB2Q71RG4 321 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 SUN5Q8TC36 379 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 TMEM208Q9BTX3 173 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 ZNF471Q9BX82 626 aaPredicted RBP11.29□□□□□ -0.6
RPP40-206ENST00000483546 DNAH7Q8WXX0 4024 aa11.29□□□□□ -0.6
RPP40-206ENST00000483546 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
RPP40-206ENST00000483546 UMAD1C9J7I0 102 aa11.28□□□□□ -0.6
RPP40-206ENST00000483546 HBE1P02100 147 aa11.28□□□□□ -0.6
RPP40-206ENST00000483546 GCHFRP30047 84 aa11.28□□□□□ -0.6
RPP40-206ENST00000483546 hCG_2014768A0A024R1R8 64 aa11.27□□□□□ -0.61
RPP40-206ENST00000483546 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
RPP40-206ENST00000483546 NMBP08949 121 aa11.27□□□□□ -0.61
RPP40-206ENST00000483546 RBMY1A1P0DJD3 496 aaKnown RBP11.27□□□□□ -0.61
RPP40-206ENST00000483546 RBMY1CP0DJD4 496 aa11.27□□□□□ -0.61
RPP40-206ENST00000483546 TPT1P13693 172 aaKnown RBP11.27□□□□□ -0.61
RPP40-206ENST00000483546 RBMY1FQ15415 496 aaKnown RBP11.27□□□□□ -0.61
RPP40-206ENST00000483546 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
RPP40-206ENST00000483546 STOML3Q8TAV4 291 aa11.27□□□□□ -0.61
RPP40-206ENST00000483546 C11orf45Q8TAV5 145 aa11.27□□□□□ -0.61
RPP40-206ENST00000483546 CMTM2Q8TAZ6 248 aa11.27□□□□□ -0.61
RPP40-206ENST00000483546 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
RPP40-206ENST00000483546 TEX48A0A1B0GUV7 120 aa11.26□□□□□ -0.61
RPP40-206ENST00000483546 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms