RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SPINK13Q1W4C9 94 aa12.96□□□□□ -0.33
HDAC6-225ENST00000483506 CEMP1Q6PRD7 247 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-225ENST00000483506 INO80EQ8NBZ0 244 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-225ENST00000483506 OR2G3Q8NGZ4 309 aa12.96□□□□□ -0.33
HDAC6-225ENST00000483506 DNAH1Q9P2D7 4330 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 LCE6AA0A183 80 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 INSP01308 110 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 NBEAP1P0C6P0 100 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 ZNF503Q96F45 646 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 ODF3Q96PU9 254 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 PSMG3Q9BT73 122 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-225ENST00000483506 PAXXQ9BUH6 204 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 RFNGQ9Y644 331 aa12.95□□□□□ -0.34
HDAC6-225ENST00000483506 FXYD6-FXYD2A0A087WZ82 144 aa12.94□□□□□ -0.34
HDAC6-225ENST00000483506 TMEM189A5PLL7 270 aa12.94□□□□□ -0.34
HDAC6-225ENST00000483506 NPIPB6E9PJ23 425 aa12.94□□□□□ -0.34
HDAC6-225ENST00000483506 M6PRP20645 277 aa12.94□□□□□ -0.34
HDAC6-225ENST00000483506 ACOT6Q3I5F7 207 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-225ENST00000483506 KHDC3LQ587J8 217 aa12.94□□□□□ -0.34
HDAC6-225ENST00000483506 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-225ENST00000483506 BLNKQ8WV28 456 aa12.94□□□□□ -0.34
HDAC6-225ENST00000483506 M0R3E3 92 aa12.93□□□□□ -0.34
HDAC6-225ENST00000483506 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-225ENST00000483506 CDKN1BP46527 198 aa12.93□□□□□ -0.34
HDAC6-225ENST00000483506 TAS2R45P59539 299 aa12.93□□□□□ -0.34
HDAC6-225ENST00000483506 BAP18Q8IXM2 172 aa12.93□□□□□ -0.34
HDAC6-225ENST00000483506 RNF141Q8WVD5 230 aa12.93□□□□□ -0.34
HDAC6-225ENST00000483506 RYR2Q92736 4967 aa12.93□□□□□ -0.34
HDAC6-225ENST00000483506 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 OR7C2O60412 319 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 HBE1P02100 147 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 OR10J4P0C629 311 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 ATP6V0CP27449 155 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 TMEM256Q8N2U0 113 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 EXOC3-AS1Q8N2X6 119 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 HSD17B11Q8NBQ5 300 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 AAMDCQ9H7C9 122 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 PPP1R14DQ9NXH3 145 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 CELA1Q9UNI1 258 aa12.92□□□□□ -0.34
HDAC6-225ENST00000483506 KLK5Q9Y337 293 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-225ENST00000483506 TRAV12-2A0A075B6T6 113 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 TSPOP30536 169 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 RAB2AP61019 212 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 UBE2L3P68036 154 aaKnown RBP12.91□□□□□ -0.34
HDAC6-225ENST00000483506 SERF2P84101 59 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 LYPD1Q8N2G4 141 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 PHYHIPLQ96FC7 376 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 C20orf144Q9BQM9 153 aa12.91□□□□□ -0.34
HDAC6-225ENST00000483506 CT45A10P0DMU9 189 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 ICAM4Q14773 271 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 PQLC2Q6ZP29 291 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 RPP25LQ8N5L8 163 aaKnown RBP12.9□□□□□ -0.34
HDAC6-225ENST00000483506 OR10G4Q8NGN3 311 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 OR10G9Q8NGN4 311 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 OR10G7Q8NGN6 311 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 TMEM208Q9BTX3 173 aa12.9□□□□□ -0.34
HDAC6-225ENST00000483506 TEX48A0A1B0GUV7 120 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 LOC102723971A0A1B0GUV8 181 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 A0A1W2PPV4 95 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 JTBO76095 146 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 MBP02144 154 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 RPL7L1Q6DKI1 246 aaKnown RBP12.89□□□□□ -0.35
HDAC6-225ENST00000483506 C9orf47Q6ZRZ4 202 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 GNPNAT1Q96EK6 184 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-225ENST00000483506 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
HDAC6-225ENST00000483506 BORCS7-ASMTA0A0B4J1R7 106 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 TAAR5O14804 337 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 LEPP41159 167 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 FAM122CQ6P4D5 195 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 Q6ZTC4 211 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 SH3BGRL3Q9H299 93 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 DKK2Q9UBU2 259 aa12.88□□□□□ -0.35
HDAC6-225ENST00000483506 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 ARPC5O15511 151 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 CDC34P49427 236 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-225ENST00000483506 TAS2R60P59551 318 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 ZNF345Q14585 488 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 Q9H3A6 140 aa12.87□□□□□ -0.35
HDAC6-225ENST00000483506 TRAV10A0A0B4J240 114 aa12.86□□□□□ -0.35
HDAC6-225ENST00000483506 RBAKDNA6NC62 111 aa12.86□□□□□ -0.35
HDAC6-225ENST00000483506 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-225ENST00000483506 EIF3GO75821 320 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDAC6-225ENST00000483506 RANP62826 216 aaKnown RBP12.86□□□□□ -0.35
HDAC6-225ENST00000483506 ERCC8Q13216 396 aa12.86□□□□□ -0.35
HDAC6-225ENST00000483506 C2CD4CQ8TF44 421 aa12.86□□□□□ -0.35
HDAC6-225ENST00000483506 CYTL1Q9NRR1 136 aa12.86□□□□□ -0.35
HDAC6-225ENST00000483506 YTHDF2Q9Y5A9 579 aaKnown RBP12.86□□□□□ -0.35
HDAC6-225ENST00000483506 IGKV2-40A0A087WW87 121 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-225ENST00000483506 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms