RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 BCL2P10415 239 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 HLA-DRB4P13762 266 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 CMC4P56277 68 aaPredicted RBP3.4□□□□□ -1.87
HDAC9-224ENST00000483142 PSG9Q00887 426 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 LINC00322Q6ZN03 302 aaPredicted RBP3.4□□□□□ -1.87
HDAC9-224ENST00000483142 FOXI2Q6ZQN5 318 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 APRG1Q8IVJ8 170 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 CCDC28AQ8IWP9 274 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 FAM24BQ8N5W8 94 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 C5orf17Q8NAS9 161 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 NKX6-2Q9C056 277 aaPredicted RBP3.4□□□□□ -1.87
HDAC9-224ENST00000483142 OTORQ9NRC9 128 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 MED9Q9NWA0 146 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 PPP1R14DQ9NXH3 145 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 HLA-DRB4X5D2U9 266 aa3.4□□□□□ -1.87
HDAC9-224ENST00000483142 NOTCH3Q9UM47 2321 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 SORL1Q92673 2214 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 A0A0J9YX75 114 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 LOC102723971A0A1B0GUV8 181 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 FBLL1A6NHQ2 334 aaKnown RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 ZNF705EA8MWA4 302 aaPredicted RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 TEX46H3BTG2 121 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 IFNA1P01562 189 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 CD7P09564 240 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 OR10J4P0C629 311 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 ZNF688P0C7X2 276 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 FGF8P55075 233 aaPredicted RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 KRTAP10-11P60412 298 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 SNRPD3P62318 126 aaKnown RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 PAFAH1B2P68402 229 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 PSG3Q16557 428 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 ZNF506Q5JVG8 444 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 AMTNQ6UX39 209 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 RBPMS2Q6ZRY4 209 aaKnown RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 TRPT1Q86TN4 253 aaKnown RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 C2CD4CQ8TF44 421 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 C20orf173Q96LM9 149 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 FAM19A4Q96LR4 140 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 Q9H3A6 140 aa3.39□□□□□ -1.87
HDAC9-224ENST00000483142 SAV1Q9H4B6 383 aaPredicted RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 YTHDF2Q9Y5A9 579 aaKnown RBP3.39□□□□□ -1.87
HDAC9-224ENST00000483142 RBMY1BA6NDE4 496 aaKnown RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 RBMY1EA6NEQ0 496 aaKnown RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 OR11H12B2RN74 326 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 DIRC3C9JPN6 131 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 TMEM250H0YL14 139 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 M0R3E3 92 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 HMGB3O15347 200 aaKnown RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 IGLV2-11P01706 119 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 TCRAP04437 139 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 RBMY1DP0C7P1 496 aaKnown RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 CRISP2P16562 243 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 ID1P41134 155 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 ATP5G3P48201 142 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 CD81P60033 236 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 CCL20P78556 96 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 MEF2BQ02080 365 aaPredicted RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 PSMG4Q5JS54 123 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 C9orf47Q6ZRZ4 202 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 Q86TA4 180 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 GTSCR1Q86UQ5 136 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 EIF4E3Q8N5X7 224 aaKnown RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 CYB561D1Q8N8Q1 229 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 TMEM75Q8N9X5 138 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 OR8A1Q8NGG7 326 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 RXFP4Q8TDU9 374 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 SFT2D1Q8WV19 159 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 HIST1H2BAQ96A08 127 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 SMIM12Q96EX1 92 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 FAM210AQ96ND0 272 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 ATG101Q9BSB4 218 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 SMDT1Q9H4I9 107 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 AAMDCQ9H7C9 122 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 AURKAIP1Q9NWT8 199 aaPredicted RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 LENEPQ9Y5L5 61 aa3.38□□□□□ -1.87
HDAC9-224ENST00000483142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.38□□□□□ -1.87
HDAC9-224ENST00000483142 KIR2DL5BA0A0G2JN68 375 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 KIR2DL5BA0A0G2JPC4 375 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 RAB19A4D1S5 217 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 LINC00862A6NCI5 91 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 KLLNB2CW77 178 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 C11orf94C9JXX5 98 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 F6UZH7 168 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 H3BMM0 161 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 H3BTX0 84 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 K7EIL1 84 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 DNASE2O00115 360 aaPredicted RBP3.37□□□□□ -1.87
HDAC9-224ENST00000483142 PEX7O00628 323 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 PDE6DO43924 150 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 PAGE4O60829 102 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 DUSP14O95147 198 aaKnown RBP3.37□□□□□ -1.87
HDAC9-224ENST00000483142 AMBPP02760 352 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 HLA-DMBP28068 263 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 DEFB131AP59861 70 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 ICAM4Q14773 271 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 GUCA2BQ16661 112 aa3.37□□□□□ -1.87
HDAC9-224ENST00000483142 MORN3Q6PF18 240 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms