RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 OR9G4Q8NGQ1 327 aa9.49□□□□□ -0.89
TSPAN1-208ENST00000482928 C11orf52Q96A22 123 aa9.49□□□□□ -0.89
TSPAN1-208ENST00000482928 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
TSPAN1-208ENST00000482928 ATG101Q9BSB4 218 aa9.49□□□□□ -0.89
TSPAN1-208ENST00000482928 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
TSPAN1-208ENST00000482928 PRELID1Q9Y255 219 aa9.49□□□□□ -0.89
TSPAN1-208ENST00000482928 IGKV3-7A0A075B6H7 116 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 DNASE2O00115 360 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 SLC17A3O00476 420 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 S100A9P06702 114 aaKnown RBP9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 FOLR2P14207 255 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 CBLN1P23435 193 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 MYCNOSP40205 109 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 ID1P41134 155 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 GNG4P50150 75 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 GNG5P63218 68 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 PAFAH1B2P68402 229 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
TSPAN1-208ENST00000482928 SERTM2A0A1B0GWG4 89 aa9.47□□□□□ -0.89
TSPAN1-208ENST00000482928 OVOL1O14753 267 aa9.47□□□□□ -0.89
TSPAN1-208ENST00000482928 TCRAP04437 139 aa9.47□□□□□ -0.89
TSPAN1-208ENST00000482928 ADIRFQ15847 76 aa9.47□□□□□ -0.89
TSPAN1-208ENST00000482928 GUCA2BQ16661 112 aa9.47□□□□□ -0.89
TSPAN1-208ENST00000482928 DLX4Q92988 240 aaPredicted RBP9.47□□□□□ -0.89
TSPAN1-208ENST00000482928 ZNF331Q9NQX6 463 aaPredicted RBP9.47□□□□□ -0.89
TSPAN1-208ENST00000482928 TAS2R60P59551 318 aa9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 FHL3Q13643 280 aa9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 AWAT1Q58HT5 328 aa9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 GOLT1AQ6ZVE7 132 aa9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 CLRN3Q8NCR9 226 aa9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 FMC1Q96HJ9 113 aa9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 DERL1Q9BUN8 251 aa9.46□□□□□ -0.9
TSPAN1-208ENST00000482928 C9JCJ5 164 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 RHEBQ15382 184 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 CENPWQ5EE01 88 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 WFDC3Q8IUB2 231 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 ARL6IP6Q8N6S5 226 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 C2CD4CQ8TF44 421 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 SDF2L1Q9HCN8 221 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 RPS10P5Q9NQ39 176 aa9.45□□□□□ -0.9
TSPAN1-208ENST00000482928 TRAV34A0A0B4J273 112 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 FBLL1A6NHQ2 334 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 B4DEV8 164 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 ISLRO14498 428 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 TSPAN4O14817 238 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 MGST1P10620 155 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 EDN2P20800 178 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 TFPI2P48307 235 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 TMEM183BQ1AE95 376 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 IGFL4Q6B9Z1 124 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 LCN12Q6JVE5 192 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 NDFIP1Q9BT67 221 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 SELENOKQ9Y6D0 94 aa9.44□□□□□ -0.9
TSPAN1-208ENST00000482928 M0R3E3 92 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 CSN3P07498 182 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 KRTAP10-3P60369 221 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 PSG3Q16557 428 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 PRNTQ86SH4 94 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 TMEM75Q8N9X5 138 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 MS4A6AQ9H2W1 248 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 BIN3Q9NQY0 253 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 MLXQ9UH92 298 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 LY96Q9Y6Y9 160 aa9.43□□□□□ -0.9
TSPAN1-208ENST00000482928 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 SAP30O75446 220 aa9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 MT-ND4LP03901 98 aa9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 HLA-DMBP28068 263 aa9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 RPL23P62829 140 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 FLI1Q01543 452 aaPredicted RBP9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 SGK494Q96LW2 274 aa9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
TSPAN1-208ENST00000482928 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 C7orf77A4D0Y5 90 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 ZNF705FA8MVS1 300 aaPredicted RBP9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 TMEM78Q5T7P6 136 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 Q86TA4 180 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 LINC01551Q86U37 167 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 SMIM12Q96EX1 92 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 PSG8Q9UQ74 426 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
TSPAN1-208ENST00000482928 RYR2Q92736 4967 aa9.4□□□□□ -0.9
TSPAN1-208ENST00000482928 CMYA5Q8N3K9 4069 aa9.4□□□□□ -0.9
TSPAN1-208ENST00000482928 RBAKDNA6NC62 111 aa9.4□□□□□ -0.9
TSPAN1-208ENST00000482928 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms