RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 LOC285556D6RIA3 1793 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 RBBP6Q7Z6E9 1792 aaKnown RBP5.37□□□□□ -1.55
LSM5-210ENST00000480956 CEP350Q5VT06 3117 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 GTF3C1Q12789 2109 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
LSM5-210ENST00000480956 NOVP48745 357 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 PLGLB1Q02325 96 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 GTF2H5Q6ZYL4 71 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 RPS19BP1Q86WX3 136 aaKnown RBP5.37□□□□□ -1.55
LSM5-210ENST00000480956 SAXO1Q8IYX7 474 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 OR5D16Q8NGK9 328 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 OR5H6Q8NGV6 325 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 ZNF714Q96N38 554 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 RERGLQ9H628 205 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 FANCMQ8IYD8 2048 aa5.37□□□□□ -1.55
LSM5-210ENST00000480956 MYH7BA7E2Y1 1941 aa5.36□□□□□ -1.55
LSM5-210ENST00000480956 BRCA2P51587 3418 aa5.36□□□□□ -1.55
LSM5-210ENST00000480956 DOCK8Q8NF50 2099 aa5.36□□□□□ -1.55
LSM5-210ENST00000480956 AQP4P55087 323 aa5.36□□□□□ -1.55
LSM5-210ENST00000480956 CLDND2Q8NHS1 167 aa5.36□□□□□ -1.55
LSM5-210ENST00000480956 PRELID3AQ96N28 172 aa5.36□□□□□ -1.55
LSM5-210ENST00000480956 ZSWIM8A7E2V4 1837 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 A0A0B4J2C4 111 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 CDC42EP2O14613 210 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 NPYP01303 97 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 IGLV1-47P01700 117 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 CCL5P13501 91 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 CDK6Q00534 326 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 KRTAP24-1Q3LI83 254 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 BPIFB6Q8NFQ5 453 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 SFT2D1Q8WV19 159 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 GINS4Q9BRT9 223 aa5.35□□□□□ -1.55
LSM5-210ENST00000480956 ZNF638Q14966 1978 aaKnown RBP5.35□□□□□ -1.55
LSM5-210ENST00000480956 PINLYPA6NC86 204 aa5.34□□□□□ -1.55
LSM5-210ENST00000480956 LHBP01229 141 aa5.34□□□□□ -1.55
LSM5-210ENST00000480956 MRPL57Q9BQC6 102 aaKnown RBP5.34□□□□□ -1.55
LSM5-210ENST00000480956 A0A0G2JMZ2 1700 aa5.34□□□□□ -1.55
LSM5-210ENST00000480956 A0A0G2JMM0 328 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 A0A1W2PPB8 328 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 C19orf71A6NCJ1 209 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 KIR3DP1A8MWS1 328 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 MT-ND6P03923 174 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 MYL5Q02045 173 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 MIAQ16674 131 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 IZUMO2Q6UXV1 221 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 SDIM1Q6ZPB5 146 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 RNF182Q8N6D2 247 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 WFDC11Q8NEX6 87 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 TXNL4BQ9NX01 149 aaKnown RBP5.34□□□□□ -1.56
LSM5-210ENST00000480956 LCTP09848 1927 aa5.34□□□□□ -1.56
LSM5-210ENST00000480956 MCM3APO60318 1980 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 EML6Q6ZMW3 1958 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 TRBV6-6A0A0A6YYG2 114 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 IGKV3D-20A0A0C4DH25 116 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 UQCRQO14949 82 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 SLC25A5P05141 298 aaKnown RBP5.33□□□□□ -1.56
LSM5-210ENST00000480956 ZNF93P35789 620 aaPredicted RBP5.33□□□□□ -1.56
LSM5-210ENST00000480956 MPV17P39210 176 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 LYZL2Q7Z4W2 148 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 SIGLECL1Q8N7X8 197 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 SMCR5Q8TEV8 140 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 CIB3Q96Q77 187 aaPredicted RBP5.33□□□□□ -1.56
LSM5-210ENST00000480956 PLXNB2O15031 1838 aa5.33□□□□□ -1.56
LSM5-210ENST00000480956 A0A096LNJ9 63 aa5.32□□□□□ -1.56
LSM5-210ENST00000480956 IGHV3-73A0A0B4J1V6 119 aa5.32□□□□□ -1.56
LSM5-210ENST00000480956 HLA-DRB4P13762 266 aa5.32□□□□□ -1.56
LSM5-210ENST00000480956 DEFB116Q30KQ4 102 aa5.32□□□□□ -1.56
LSM5-210ENST00000480956 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
LSM5-210ENST00000480956 MORN4Q8NDC4 146 aa5.32□□□□□ -1.56
LSM5-210ENST00000480956 HLA-DRB4X5D2U9 266 aa5.32□□□□□ -1.56
LSM5-210ENST00000480956 C3orf84H3BNL1 204 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 SMDT1Q9H4I9 107 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 COMMD3Q9UBI1 195 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 HTTP42858 3142 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 PLXNA1Q9UIW2 1896 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 IGKV1OR2-108A0A075B7D4 117 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 A8MUU9 505 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 RER1O15258 196 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 HIST1H1DP16402 221 aaKnown RBP5.31□□□□□ -1.56
LSM5-210ENST00000480956 EIF2B2P49770 351 aaKnown RBP5.31□□□□□ -1.56
LSM5-210ENST00000480956 GFI1BQ5VTD9 330 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 SOSTDC1Q6X4U4 206 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 CYB561D1Q8N8Q1 229 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 MIEN1Q9BRT3 115 aa5.31□□□□□ -1.56
LSM5-210ENST00000480956 BTG2P78543 158 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 TMEM155Q4W5P6 130 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 TMEM91Q6ZNR0 172 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 C7orf65Q6ZTY9 151 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 TEN1Q86WV5 123 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 LINC00311Q8N616 119 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 OR10P1Q8NGE3 313 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 MCEEQ96PE7 176 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 RNF5Q99942 180 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 SNRNP25Q9BV90 132 aaKnown RBP5.3□□□□□ -1.56
LSM5-210ENST00000480956 C16orf95Q9H693 158 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 MPC1Q9Y5U8 109 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 LRRC37A2A6NM11 1700 aa5.3□□□□□ -1.56
LSM5-210ENST00000480956 OBSL1O75147 1896 aa5.29□□□□□ -1.56
LSM5-210ENST00000480956 MDFIC2A0A1B0GVS7 189 aa5.29□□□□□ -1.56
LSM5-210ENST00000480956 CCDC179H3BU77 68 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms