RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 OR10J6PQ8NGY7 276 aa12.14□□□□□ -0.47
HSPG2-209ENST00000480900 NIPSNAP3BQ9BS92 247 aa12.14□□□□□ -0.47
HSPG2-209ENST00000480900 WDR61Q9GZS3 305 aaKnown RBP12.14□□□□□ -0.47
HSPG2-209ENST00000480900 KMT2AQ03164 3969 aa12.13□□□□□ -0.47
HSPG2-209ENST00000480900 TRBV19A0A075B6N1 114 aa12.13□□□□□ -0.47
HSPG2-209ENST00000480900 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
HSPG2-209ENST00000480900 CDKN1BP46527 198 aa12.13□□□□□ -0.47
HSPG2-209ENST00000480900 PDE6HQ13956 83 aa12.13□□□□□ -0.47
HSPG2-209ENST00000480900 GCSAMLQ5JQS6 135 aa12.13□□□□□ -0.47
HSPG2-209ENST00000480900 ATP5SQ99766 215 aa12.13□□□□□ -0.47
HSPG2-209ENST00000480900 HSPB11Q9Y547 144 aa12.13□□□□□ -0.47
HSPG2-209ENST00000480900 ZNF705GA8MUZ8 300 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-209ENST00000480900 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
HSPG2-209ENST00000480900 PTTG1O95997 202 aa12.12□□□□□ -0.47
HSPG2-209ENST00000480900 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-209ENST00000480900 MRPL53Q96EL3 112 aaKnown RBP12.12□□□□□ -0.47
HSPG2-209ENST00000480900 MBD2Q9UBB5 411 aa12.12□□□□□ -0.47
HSPG2-209ENST00000480900 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
HSPG2-209ENST00000480900 RPP25LQ8N5L8 163 aaKnown RBP12.11□□□□□ -0.47
HSPG2-209ENST00000480900 LINC01587Q99440 93 aa12.11□□□□□ -0.47
HSPG2-209ENST00000480900 C20orf144Q9BQM9 153 aa12.11□□□□□ -0.47
HSPG2-209ENST00000480900 NDUFAF3Q9BU61 184 aa12.11□□□□□ -0.47
HSPG2-209ENST00000480900 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
HSPG2-209ENST00000480900 ALG5Q9Y673 324 aa12.11□□□□□ -0.47
HSPG2-209ENST00000480900 LYRM9A8MSI8 78 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 NPIPB6E9PJ23 425 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 NDUFB4O95168 129 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 PRM2P04554 102 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 PYYP10082 97 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 RPL12P30050 165 aaKnown RBP12.1□□□□□ -0.47
HSPG2-209ENST00000480900 TAS2R60P59551 318 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 FAM210BQ96KR6 192 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 FAM167A-AS1Q96KT0 104 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 ODF3Q96PU9 254 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 SLC25A2Q9BXI2 301 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 PRELID1Q9Y255 219 aa12.1□□□□□ -0.47
HSPG2-209ENST00000480900 VPS13DQ5THJ4 4388 aa12.09□□□□□ -0.47
HSPG2-209ENST00000480900 DAD1P61803 113 aa12.09□□□□□ -0.47
HSPG2-209ENST00000480900 MIR17HGQ75NE6 70 aa12.09□□□□□ -0.47
HSPG2-209ENST00000480900 TIMM9Q9Y5J7 89 aa12.09□□□□□ -0.47
HSPG2-209ENST00000480900 PLAC8L1A1L4L8 177 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 H7BYZ3 331 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 IFNA5P01569 189 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 LEPP41159 167 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 ZNF493Q6ZR52 646 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 BLNKQ8WV28 456 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 C16orf74Q96GX8 76 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 PARD6GQ9BYG4 376 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-209ENST00000480900 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 FUT9Q9Y231 359 aa12.08□□□□□ -0.48
HSPG2-209ENST00000480900 M0R3E3 92 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 CT45A10P0DMU9 189 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 AZU1P20160 251 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 GFI1BQ5VTD9 330 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 SCGB1C1Q8TD33 95 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 SMIM3Q9BZL3 60 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 OR51M1Q9H341 326 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 AAMDCQ9H7C9 122 aa12.07□□□□□ -0.48
HSPG2-209ENST00000480900 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
HSPG2-209ENST00000480900 FFAR4Q5NUL3 377 aa12.06□□□□□ -0.48
HSPG2-209ENST00000480900 TMEM263Q8WUH6 116 aaKnown RBP12.06□□□□□ -0.48
HSPG2-209ENST00000480900 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
HSPG2-209ENST00000480900 DNAH6Q9C0G6 4158 aa12.06□□□□□ -0.48
HSPG2-209ENST00000480900 P0DMU3 169 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 FAM231AP0DMU4 169 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 FAM231CP0DMU5 169 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 HTN1P15515 57 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 HTN3P15516 51 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 ICAM4Q14773 271 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 EXOC3-AS1Q8N2X6 119 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 RNASE8Q8TDE3 154 aaKnown RBP12.05□□□□□ -0.48
HSPG2-209ENST00000480900 FXYD5Q96DB9 178 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 MED28Q9H204 178 aa12.05□□□□□ -0.48
HSPG2-209ENST00000480900 EPPK1P58107 5090 aaKnown RBP12.05□□□□□ -0.48
HSPG2-209ENST00000480900 OR7C2O60412 319 aa12.04□□□□□ -0.48
HSPG2-209ENST00000480900 OR10J4P0C629 311 aa12.04□□□□□ -0.48
HSPG2-209ENST00000480900 FCN2Q15485 313 aa12.04□□□□□ -0.48
HSPG2-209ENST00000480900 RNF141Q8WVD5 230 aa12.04□□□□□ -0.48
HSPG2-209ENST00000480900 LINC00477Q96M19 166 aa12.04□□□□□ -0.48
HSPG2-209ENST00000480900 WFDC1Q9HC57 220 aa12.04□□□□□ -0.48
HSPG2-209ENST00000480900 TIMM8BQ9Y5J9 83 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-209ENST00000480900 NACAE9PAV3 2078 aa12.04□□□□□ -0.48
HSPG2-209ENST00000480900 SLC25A5P05141 298 aaKnown RBP12.03□□□□□ -0.48
HSPG2-209ENST00000480900 ERCC8Q13216 396 aa12.03□□□□□ -0.48
HSPG2-209ENST00000480900 KHDC3LQ587J8 217 aa12.03□□□□□ -0.48
HSPG2-209ENST00000480900 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
HSPG2-209ENST00000480900 TRAV12-3A0A0B4J271 114 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 KLLNB2CW77 178 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 J3KRW8 73 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 DEFB130BP0DP73 79 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 DEFB130AP0DP74 79 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 TAS2R45P59539 299 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 FAM122CQ6P4D5 195 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 CCDC28AQ8IWP9 274 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 ZNF503Q96F45 646 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 PHYHIPLQ96FC7 376 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
HSPG2-209ENST00000480900 PYGO2Q9BRQ0 406 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms