RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 H0YIZ8 118 aa10.69□□□□□ -0.7
TDP2-205ENST00000480495 SSNA1O43805 119 aa10.69□□□□□ -0.7
TDP2-205ENST00000480495 H2BFSP57053 126 aa10.69□□□□□ -0.7
TDP2-205ENST00000480495 DAD1P61803 113 aa10.69□□□□□ -0.7
TDP2-205ENST00000480495 MRPL53Q96EL3 112 aaKnown RBP10.69□□□□□ -0.7
TDP2-205ENST00000480495 LINC01587Q99440 93 aa10.69□□□□□ -0.7
TDP2-205ENST00000480495 C20orf144Q9BQM9 153 aa10.69□□□□□ -0.7
TDP2-205ENST00000480495 KCNIP2Q9NS61 270 aa10.69□□□□□ -0.7
TDP2-205ENST00000480495 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 PET100P0DJ07 73 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 P0DMU3 169 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 HIST1H1EP10412 219 aaKnown RBP10.68□□□□□ -0.7
TDP2-205ENST00000480495 TAS2R60P59551 318 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 THAP6Q8TBB0 222 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 PPP1R1CQ8WVI7 109 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 ZNF586Q9NXT0 402 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 VPS13DQ5THJ4 4388 aa10.68□□□□□ -0.7
TDP2-205ENST00000480495 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
TDP2-205ENST00000480495 PRM2P04554 102 aa10.67□□□□□ -0.7
TDP2-205ENST00000480495 PRB4P10163 310 aaPredicted RBP10.67□□□□□ -0.7
TDP2-205ENST00000480495 PDE6HQ13956 83 aa10.67□□□□□ -0.7
TDP2-205ENST00000480495 CLINT1Q14677 625 aa10.67□□□□□ -0.7
TDP2-205ENST00000480495 ODF3Q96PU9 254 aa10.67□□□□□ -0.7
TDP2-205ENST00000480495 WDR61Q9GZS3 305 aaKnown RBP10.67□□□□□ -0.7
TDP2-205ENST00000480495 PRELID1Q9Y255 219 aa10.67□□□□□ -0.7
TDP2-205ENST00000480495 H7BYZ3 331 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 MPC2O95563 127 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 HTN3P15516 51 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 AZU1P20160 251 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 GCSAMLQ5JQS6 135 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 ZNF493Q6ZR52 646 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 TIMM9Q9Y5J7 89 aa10.66□□□□□ -0.7
TDP2-205ENST00000480495 PLAC8L1A1L4L8 177 aa10.65□□□□□ -0.7
TDP2-205ENST00000480495 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
TDP2-205ENST00000480495 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.7
TDP2-205ENST00000480495 LEPP41159 167 aa10.65□□□□□ -0.7
TDP2-205ENST00000480495 POM121L12Q8N7R1 296 aa10.65□□□□□ -0.7
TDP2-205ENST00000480495 ATP5SQ99766 215 aa10.65□□□□□ -0.7
TDP2-205ENST00000480495 NDUFB4O95168 129 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 CT45A10P0DMU9 189 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 PYYP10082 97 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 HTN1P15515 57 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 GFI1BQ5VTD9 330 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 SLC25A2Q9BXI2 301 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 MRPL32Q9BYC8 188 aaKnown RBP10.64□□□□□ -0.71
TDP2-205ENST00000480495 AAMDCQ9H7C9 122 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 HSPB11Q9Y547 144 aa10.64□□□□□ -0.71
TDP2-205ENST00000480495 TIMM8BQ9Y5J9 83 aaPredicted RBP10.64□□□□□ -0.71
TDP2-205ENST00000480495 RPL12P30050 165 aaKnown RBP10.63□□□□□ -0.71
TDP2-205ENST00000480495 KIR3DS1Q14943 382 aa10.63□□□□□ -0.71
TDP2-205ENST00000480495 MIR17HGQ75NE6 70 aa10.63□□□□□ -0.71
TDP2-205ENST00000480495 RNASE8Q8TDE3 154 aaKnown RBP10.63□□□□□ -0.71
TDP2-205ENST00000480495 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
TDP2-205ENST00000480495 BLNKQ8WV28 456 aa10.63□□□□□ -0.71
TDP2-205ENST00000480495 FAM167A-AS1Q96KT0 104 aa10.63□□□□□ -0.71
TDP2-205ENST00000480495 PARD6GQ9BYG4 376 aaPredicted RBP10.63□□□□□ -0.71
TDP2-205ENST00000480495 M0R3E3 92 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 IFNA5P01569 189 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 DEFB130BP0DP73 79 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 DEFB130AP0DP74 79 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 TMEM88Q6PEY1 159 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 CCDC28AQ8IWP9 274 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 SCGB1C1Q8TD33 95 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 LINC00477Q96M19 166 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 OR51M1Q9H341 326 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 MBD2Q9UBB5 411 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 FUT9Q9Y231 359 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 BIRC6Q9NR09 4857 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 DNAH6Q9C0G6 4158 aa10.62□□□□□ -0.71
TDP2-205ENST00000480495 CBY3A6NI87 242 aa10.61□□□□□ -0.71
TDP2-205ENST00000480495 SLC25A5P05141 298 aaKnown RBP10.61□□□□□ -0.71
TDP2-205ENST00000480495 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
TDP2-205ENST00000480495 FCN2Q15485 313 aa10.61□□□□□ -0.71
TDP2-205ENST00000480495 EXOC3-AS1Q8N2X6 119 aa10.61□□□□□ -0.71
TDP2-205ENST00000480495 PAXXQ9BUH6 204 aa10.61□□□□□ -0.71
TDP2-205ENST00000480495 PTTG1O95997 202 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 ATP5G1P05496 136 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 ATP5G3P48201 142 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 ICAM4Q14773 271 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 RNF212Q495C1 297 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 UBE2DNLQ8IWF7 75 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 RNF141Q8WVD5 230 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 PYGO2Q9BRQ0 406 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 NOP10Q9NPE3 64 aaKnown RBP10.6□□□□□ -0.71
TDP2-205ENST00000480495 ALG5Q9Y673 324 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 DNAH10Q8IVF4 4471 aa10.6□□□□□ -0.71
TDP2-205ENST00000480495 TRAV12-3A0A0B4J271 114 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 F5H768 121 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 J3KRW8 73 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 ERCC8Q13216 396 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 FFAR4Q5NUL3 377 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 C9orf47Q6ZRZ4 202 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 FXYD5Q96DB9 178 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 FAM19A4Q96LR4 140 aa10.59□□□□□ -0.71
TDP2-205ENST00000480495 SMIM3Q9BZL3 60 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms