RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 A0A1W2PPQ1 181 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 SMIM27A0A1W2PRY6 76 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 ZNF320A2RRD8 509 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 C19orf71A6NCJ1 209 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 NPIPB6E9PJ23 425 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 ZNF207O43670 478 aaKnown RBP8.4□□□□□ -1.06
VTI1A-204ENST00000480057 GATCO43716 136 aaKnown RBP8.4□□□□□ -1.06
VTI1A-204ENST00000480057 LY6G6DO95868 133 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 COX19Q49B96 90 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 LCN12Q6JVE5 192 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 C8orf86Q6ZUL3 223 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 PRNTQ86SH4 94 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 NUDT10Q8NFP7 164 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 C4orf3Q8WVX3 66 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 NUDT11Q96G61 164 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 DUX5Q96PT3 197 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.06
VTI1A-204ENST00000480057 RNASE7Q9H1E1 156 aaKnown RBP8.4□□□□□ -1.06
VTI1A-204ENST00000480057 FLNAP21333 2647 aaKnown RBP8.4□□□□□ -1.07
VTI1A-204ENST00000480057 CCDC168Q8NDH2 2452 aa8.4□□□□□ -1.07
VTI1A-204ENST00000480057 MAP1AP78559 2803 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-204ENST00000480057 CELSR1Q9NYQ6 3014 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 TRAV8-2A0A0B4J237 113 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 IGHV3-66A0A0C4DH42 116 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 LOC105371267A0A1B0GV96 52 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 FAM231BA6NCW3 169 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 ZNF705GA8MUZ8 300 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-204ENST00000480057 NDUFA7O95182 113 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 GBGT1Q8N5D6 347 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 NHLRC2Q8NBF2 726 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 DAZAP1Q96EP5 407 aaKnown RBP8.39□□□□□ -1.07
VTI1A-204ENST00000480057 GFRA4Q9GZZ7 299 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 NRN1Q9NPD7 142 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 PPP1R14DQ9NXH3 145 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 AKAP9Q99996 3911 aa8.39□□□□□ -1.07
VTI1A-204ENST00000480057 IGHV4OR15-8A0A075B7B6 117 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 IGHV3OR16-13A0A075B7E8 117 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 A0A087WW49 117 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 IGHV3-49A0A0A0MS15 119 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 IGHV3-74A0A0B4J1X5 117 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 TMEM213A2RRL7 107 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 SOCS3O14543 225 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 P01737 135 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 RASL11AQ6T310 242 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 TSKUQ8WUA8 353 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 C16orf92Q96LL3 132 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 NDFIP1Q9BT67 221 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 RPP21Q9H633 154 aaKnown RBP8.38□□□□□ -1.07
VTI1A-204ENST00000480057 ITPR2Q14571 2701 aa8.38□□□□□ -1.07
VTI1A-204ENST00000480057 IZUMO1RA6ND01 250 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 A8MWL6 223 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 LINC01619G3V211 115 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 OVOL1O14753 267 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 CT45A10P0DMU9 189 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 HOXD3P31249 432 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-204ENST00000480057 KLF5Q13887 457 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-204ENST00000480057 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 C9orf47Q6ZRZ4 202 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 PRR25Q96S07 402 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-204ENST00000480057 LENEPQ9Y5L5 61 aa8.37□□□□□ -1.07
VTI1A-204ENST00000480057 IGKV2-40A0A087WW87 121 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-204ENST00000480057 M0QZ24 198 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 PHOX2AO14813 284 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 IGKV2D-40P01614 121 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-204ENST00000480057 MT-ND6P03923 174 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 TRGC2P03986 189 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 ID1P41134 155 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 SRSF2Q01130 221 aaKnown RBP8.36□□□□□ -1.07
VTI1A-204ENST00000480057 TCTEX1D4Q5JR98 221 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 NAT8BQ9UHF3 227 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
VTI1A-204ENST00000480057 FASNP49327 2511 aaKnown RBP8.35□□□□□ -1.07
VTI1A-204ENST00000480057 TRBV7-9A0A0J9YWB2 115 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 S100A6P06703 90 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 ZNF138P52744 262 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 FOXA3P55318 350 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-204ENST00000480057 LINC00322Q6ZN03 302 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-204ENST00000480057 TCF24Q7RTU0 167 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 ATP5L2Q7Z4Y8 100 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 OR1N2Q8NGR9 330 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 LINC01006Q8NI28 216 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 DPF1Q92782 380 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 LINC00477Q96M19 166 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 GNB1LQ9BYB4 327 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 PEMTQ9UBM1 199 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
VTI1A-204ENST00000480057 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
VTI1A-204ENST00000480057 TRAV2A0A0B4J234 112 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 C2orf70A6NJV1 201 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 ZNF705FA8MVS1 300 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-204ENST00000480057 CBLN1P23435 193 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 SYNJ2BPP57105 145 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms