RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ZNF90Q03938 601 aa10.39□□□□□ -0.75
ATG4B-218ENST00000479554 RBMY1FQ15415 496 aaKnown RBP10.39□□□□□ -0.75
ATG4B-218ENST00000479554 GUK1Q16774 197 aa10.39□□□□□ -0.75
ATG4B-218ENST00000479554 LCN15Q6UWW0 184 aa10.39□□□□□ -0.75
ATG4B-218ENST00000479554 CYP2G1PQ6ZSU1 146 aa10.39□□□□□ -0.75
ATG4B-218ENST00000479554 LINC00052Q96N35 136 aa10.39□□□□□ -0.75
ATG4B-218ENST00000479554 SMDT1Q9H4I9 107 aa10.39□□□□□ -0.75
ATG4B-218ENST00000479554 X6R8D5 127 aa10.39□□□□□ -0.75
ATG4B-218ENST00000479554 IGKV1OR2-108A0A075B7D4 117 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 A0A1W2PPV4 95 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 TMEM218A2RU14 115 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 LINC00869P0C866 280 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 TCTAP57738 103 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 CCL20P78556 96 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 SSX7Q7RTT5 188 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 RAB24Q969Q5 203 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 C1QTNF4Q9BXJ3 329 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 SLC25A22Q9H936 323 aa10.38□□□□□ -0.75
ATG4B-218ENST00000479554 RBFOX3A6NFN3 312 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 IGLL5B9A064 214 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 H3BMM0 161 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 IFNA1P01562 189 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 HLA-DRB4P13762 266 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 RHOBP62745 196 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 SRSF3P84103 164 aaKnown RBP10.37□□□□□ -0.75
ATG4B-218ENST00000479554 TRGV9Q99603 122 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 SCRT1Q9BWW7 348 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 EIF5A2Q9GZV4 153 aaKnown RBP10.37□□□□□ -0.75
ATG4B-218ENST00000479554 HLA-DRB4X5D2U9 266 aa10.37□□□□□ -0.75
ATG4B-218ENST00000479554 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-218ENST00000479554 HLA-DMBP28068 263 aa10.36□□□□□ -0.75
ATG4B-218ENST00000479554 ID1P41134 155 aa10.36□□□□□ -0.75
ATG4B-218ENST00000479554 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-218ENST00000479554 GCSAMLQ5JQS6 135 aa10.36□□□□□ -0.75
ATG4B-218ENST00000479554 ZNF506Q5JVG8 444 aa10.36□□□□□ -0.75
ATG4B-218ENST00000479554 C1orf194Q5T5A4 169 aa10.36□□□□□ -0.75
ATG4B-218ENST00000479554 Q6ZTC4 211 aa10.36□□□□□ -0.75
ATG4B-218ENST00000479554 XCL2Q9UBD3 114 aa10.36□□□□□ -0.75
ATG4B-218ENST00000479554 TRAV10A0A0B4J240 114 aa10.35□□□□□ -0.75
ATG4B-218ENST00000479554 TAGLN2P37802 199 aaKnown RBP10.35□□□□□ -0.75
ATG4B-218ENST00000479554 PSMB3P49720 205 aa10.35□□□□□ -0.75
ATG4B-218ENST00000479554 PPT1P50897 306 aa10.35□□□□□ -0.75
ATG4B-218ENST00000479554 OR1L4Q8NGR5 311 aa10.35□□□□□ -0.75
ATG4B-218ENST00000479554 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
ATG4B-218ENST00000479554 HECTD4Q9Y4D8 3996 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 F8W036 122 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 IGKV3-20P01619 116 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 STAG3L2P0CL84 134 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 STAG3L3P0CL85 134 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 KHDC3LQ587J8 217 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 C10orf91Q5T1B1 145 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 OR8I2Q8N0Y5 310 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 PFDN5Q99471 154 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 APLNQ9ULZ1 77 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
ATG4B-218ENST00000479554 C9JQL5 133 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 SOCS3O14543 225 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 HMGB3O15347 200 aaKnown RBP10.33□□□□□ -0.76
ATG4B-218ENST00000479554 CXorf1O96002 111 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 OR5G3P0C626 314 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 SFTA3P0C7M3 94 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 BCL2P10415 239 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 GATA2P23769 480 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-218ENST00000479554 DEFB1P60022 68 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 ICAM4Q14773 271 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 GDF5OSQ5U4N7 250 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 FAM78BQ5VT40 261 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 FOXI2Q6ZQN5 318 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 SEC11CQ9BY50 192 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 MRPL32Q9BYC8 188 aaKnown RBP10.33□□□□□ -0.76
ATG4B-218ENST00000479554 SLC35B3Q9H1N7 401 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-218ENST00000479554 DNAJC4Q9NNZ3 241 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 MANBALQ9NQG1 85 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 FUT9Q9Y231 359 aa10.33□□□□□ -0.76
ATG4B-218ENST00000479554 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 ISLRO14498 428 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 COX7A2P2O60397 106 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 EIF3GO75821 320 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATG4B-218ENST00000479554 MEOX2P50222 304 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 FXYD7P58549 80 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 TAS2R45P59539 299 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 SAMD13Q5VXD3 122 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 CCDC28AQ8IWP9 274 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 RXFP4Q8TDU9 374 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 VAX2Q9UIW0 290 aa10.32□□□□□ -0.76
ATG4B-218ENST00000479554 CARHSP1Q9Y2V2 147 aaKnown RBP10.32□□□□□ -0.76
ATG4B-218ENST00000479554 NDUFS6O75380 124 aaKnown RBP10.31□□□□□ -0.76
ATG4B-218ENST00000479554 APOC3P02656 99 aa10.31□□□□□ -0.76
ATG4B-218ENST00000479554 SRP19P09132 144 aaKnown RBP10.31□□□□□ -0.76
ATG4B-218ENST00000479554 ARL14EPLP0DKL9 152 aa10.31□□□□□ -0.76
ATG4B-218ENST00000479554 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
ATG4B-218ENST00000479554 GALR1P47211 349 aa10.31□□□□□ -0.76
ATG4B-218ENST00000479554 C10orf113Q5VZT2 155 aa10.31□□□□□ -0.76
ATG4B-218ENST00000479554 SPATA31B1PQ5VZV4 182 aa10.31□□□□□ -0.76
ATG4B-218ENST00000479554 EBLN2Q6P2I7 272 aa10.31□□□□□ -0.76
ATG4B-218ENST00000479554 ZNF705AQ6ZN79 300 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-218ENST00000479554 IQCF2Q8IXL9 164 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms