RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TAS2R60P59551 318 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 B2MP61769 119 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 PXDC1Q5TGL8 231 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 Q6ZRG5 221 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 S100A7AQ86SG5 101 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 ATG101Q9BSB4 218 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 GPN1Q9HCN4 374 aaPredicted RBP12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 PXMP4Q9Y6I8 212 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 CT45A10P0DMU9 189 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 CXCL2P19875 107 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 RNASE8Q8TDE3 154 aaKnown RBP12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 RNF141Q8WVD5 230 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 LYRM2Q9NU23 88 aaPredicted RBP12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 SLC39A9Q9NUM3 307 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 ATP5G1P05496 136 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 PVALBP20472 110 aaPredicted RBP12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 ATP5G3P48201 142 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 SULT1A1P50225 295 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 IL15RAQ13261 267 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 LRRC37A5PQ49AS3 106 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 ZNF575Q86XF7 245 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 TMEM256Q8N2U0 113 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 THAP6Q8TBB0 222 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 BLNKQ8WV28 456 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 CCDC32Q9BV29 185 aa12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
ECHDC1-216ENST00000479525 A0A0J9YY99 117 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 GAGE12BA1L429 117 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 GAGE7O76087 117 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 GAGE12FP0CL80 117 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 GAGE12GP0CL81 117 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 GAGE12IP0CL82 117 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 NHLH2Q02577 135 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 RAB31Q13636 194 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 VWC2Q2TAL6 325 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 RNF212Q495C1 297 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 C15orf53Q8NAA6 179 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
ECHDC1-216ENST00000479525 H7BYZ3 331 aa12.16□□□□□ -0.46
ECHDC1-216ENST00000479525 OR5I1Q13606 314 aa12.16□□□□□ -0.46
ECHDC1-216ENST00000479525 STX12Q86Y82 276 aa12.16□□□□□ -0.46
ECHDC1-216ENST00000479525 EXOC3-AS1Q8N2X6 119 aa12.16□□□□□ -0.46
ECHDC1-216ENST00000479525 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-216ENST00000479525 OR5AC2Q9NZP5 309 aa12.16□□□□□ -0.46
ECHDC1-216ENST00000479525 CBY3A6NI87 242 aa12.15□□□□□ -0.46
ECHDC1-216ENST00000479525 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.46
ECHDC1-216ENST00000479525 PFDN5Q99471 154 aa12.15□□□□□ -0.46
ECHDC1-216ENST00000479525 RNF24Q9Y225 148 aa12.15□□□□□ -0.46
ECHDC1-216ENST00000479525 LINC00588Q9Y4M8 146 aa12.15□□□□□ -0.46
ECHDC1-216ENST00000479525 NPIPB6E9PJ23 425 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 NDUFB4O95168 129 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 HOXA5P20719 270 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 S100A11P31949 105 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 IFITM3Q01628 133 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 BTN1A1Q13410 526 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 CLINT1Q14677 625 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 C1orf134Q5TEV5 83 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 MZT2BQ6NZ67 158 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 Q6ZQT7 251 aa12.14□□□□□ -0.47
ECHDC1-216ENST00000479525 MUC4Q99102 2169 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 TRBV19A0A075B6N1 114 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 TRAV26-1A0A087WT03 109 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 EIF3GO75821 320 aaKnown RBP eCLIP12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 TNP2Q05952 138 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 CD300CQ08708 224 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 ASAH1Q13510 395 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 MIR17HGQ75NE6 70 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 OR5C1Q8NGR4 320 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 ZNRF2Q8NHG8 242 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 ENKURQ8TC29 256 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 SLC25A2Q9BXI2 301 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
ECHDC1-216ENST00000479525 H0YIZ8 118 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 LEPP41159 167 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 HBG1P69891 147 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 HBG2P69892 147 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 FAM122CQ6P4D5 195 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 Q6ZTI0 123 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 CCDC28AQ8IWP9 274 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 TMPRSS5Q9H3S3 457 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
ECHDC1-216ENST00000479525 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
ECHDC1-216ENST00000479525 SNURFLB1AK76 121 aa12.11□□□□□ -0.47
ECHDC1-216ENST00000479525 ICAM4Q14773 271 aa12.11□□□□□ -0.47
ECHDC1-216ENST00000479525 PRR9Q5T870 116 aa12.11□□□□□ -0.47
ECHDC1-216ENST00000479525 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
ECHDC1-216ENST00000479525 AGPAT4-IT1Q9H0P7 198 aa12.11□□□□□ -0.47
ECHDC1-216ENST00000479525 NBDYA0A0U1RRE5 68 aa12.1□□□□□ -0.47
ECHDC1-216ENST00000479525 RLN2P04090 185 aa12.1□□□□□ -0.47
ECHDC1-216ENST00000479525 OR10J4P0C629 311 aa12.1□□□□□ -0.47
ECHDC1-216ENST00000479525 GUK1Q16774 197 aa12.1□□□□□ -0.47
ECHDC1-216ENST00000479525 SSX7Q7RTT5 188 aa12.1□□□□□ -0.47
ECHDC1-216ENST00000479525 VGLL1Q99990 258 aa12.1□□□□□ -0.47
ECHDC1-216ENST00000479525 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms