RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	TENM3	Q9P273	2699 aa		13.19	□□□□□ -0.3
RFK-204	ENST00000479197	SEC11B	P0C7V7	166 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	ARL14EPL	P0DKL9	152 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	C4BPB	P20851	252 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	STOML3	Q8TAV4	291 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	PHYHIPL	Q96FC7	376 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	AAMDC	Q9H7C9	122 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.18	□□□□□ -0.3
RFK-204	ENST00000479197	DUSP14	O95147	198 aa	Known RBP	13.18	□□□□□ -0.3
RFK-204	ENST00000479197	CNN1	P51911	297 aa	Known RBP	13.18	□□□□□ -0.3
RFK-204	ENST00000479197	EXOC3-AS1	Q8N2X6	119 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	C9orf62	Q8N4C0	152 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	OR8A1	Q8NGG7	326 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	MRPL53	Q96EL3	112 aa	Known RBP	13.18	□□□□□ -0.3
RFK-204	ENST00000479197	TP53TG1	Q9Y2A0	90 aa		13.18	□□□□□ -0.3
RFK-204	ENST00000479197	CTXND1	A0A1B0GTU2	59 aa		13.17	□□□□□ -0.3
RFK-204	ENST00000479197		A8MTW9	85 aa		13.17	□□□□□ -0.3
RFK-204	ENST00000479197	GIG44	P09565	113 aa	Predicted RBP	13.17	□□□□□ -0.3
RFK-204	ENST00000479197	ZNF705D	P0CH99	300 aa	Predicted RBP	13.17	□□□□□ -0.3
RFK-204	ENST00000479197	ZNF705B	P0CI00	300 aa	Predicted RBP	13.17	□□□□□ -0.3
RFK-204	ENST00000479197	HIST1H1A	Q02539	215 aa	Predicted RBP	13.17	□□□□□ -0.3
RFK-204	ENST00000479197	SSX7	Q7RTT5	188 aa		13.17	□□□□□ -0.3
RFK-204	ENST00000479197	RNF183	Q96D59	192 aa		13.17	□□□□□ -0.3
RFK-204	ENST00000479197	OVOL2	Q9BRP0	275 aa		13.17	□□□□□ -0.3
RFK-204	ENST00000479197	PRELID1	Q9Y255	219 aa		13.17	□□□□□ -0.3
RFK-204	ENST00000479197		M0R3E3	92 aa		13.16	□□□□□ -0.3
RFK-204	ENST00000479197	SPRY2	O43597	315 aa		13.16	□□□□□ -0.3
RFK-204	ENST00000479197	PRB4	P10163	310 aa	Predicted RBP	13.16	□□□□□ -0.3
RFK-204	ENST00000479197	ICAM4	Q14773	271 aa		13.16	□□□□□ -0.3
RFK-204	ENST00000479197	ZNF726P1	Q15940	193 aa		13.16	□□□□□ -0.3
RFK-204	ENST00000479197	LYPD1	Q8N2G4	141 aa		13.16	□□□□□ -0.3
RFK-204	ENST00000479197	UMAD1	C9J7I0	102 aa		13.15	□□□□□ -0.3
RFK-204	ENST00000479197	PRAC2	D3DTV9	90 aa		13.15	□□□□□ -0.3
RFK-204	ENST00000479197	CXorf1	O96002	111 aa		13.15	□□□□□ -0.3
RFK-204	ENST00000479197	RAN	P62826	216 aa	Known RBP	13.15	□□□□□ -0.3
RFK-204	ENST00000479197	TMED6	Q8WW62	240 aa		13.15	□□□□□ -0.3
RFK-204	ENST00000479197	C1QTNF4	Q9BXJ3	329 aa		13.15	□□□□□ -0.3
RFK-204	ENST00000479197	SLC35B3	Q9H1N7	401 aa		13.15	□□□□□ -0.3
RFK-204	ENST00000479197	GCHFR	P30047	84 aa		13.14	□□□□□ -0.31
RFK-204	ENST00000479197	AMTN	Q6UX39	209 aa		13.14	□□□□□ -0.31
RFK-204	ENST00000479197	SLC51B	Q86UW2	128 aa		13.14	□□□□□ -0.31
RFK-204	ENST00000479197	OR10J6P	Q8NGY7	276 aa		13.14	□□□□□ -0.31
RFK-204	ENST00000479197		Q9H3A6	140 aa		13.14	□□□□□ -0.31
RFK-204	ENST00000479197	PLA2G2E	Q9NZK7	142 aa		13.14	□□□□□ -0.31
RFK-204	ENST00000479197	STAB2	Q8WWQ8	2551 aa		13.14	□□□□□ -0.31
RFK-204	ENST00000479197	FXYD7	P58549	80 aa		13.13	□□□□□ -0.31
RFK-204	ENST00000479197	TMEM167B	Q9NRX6	74 aa		13.13	□□□□□ -0.31
RFK-204	ENST00000479197	XCL2	Q9UBD3	114 aa		13.13	□□□□□ -0.31
RFK-204	ENST00000479197	EIF5AL1	Q6IS14	154 aa	Known RBP	13.13	□□□□□ -0.31
RFK-204	ENST00000479197	SUN5	Q8TC36	379 aa		13.13	□□□□□ -0.31
RFK-204	ENST00000479197	OTOR	Q9NRC9	128 aa		13.13	□□□□□ -0.31
RFK-204	ENST00000479197	MAP1LC3B2	A6NCE7	125 aa		13.12	□□□□□ -0.31
RFK-204	ENST00000479197	FHIT	P49789	147 aa		13.12	□□□□□ -0.31
RFK-204	ENST00000479197	NKX2-5	P52952	324 aa	Predicted RBP	13.12	□□□□□ -0.31
RFK-204	ENST00000479197	DPPA3	Q6W0C5	159 aa		13.12	□□□□□ -0.31
RFK-204	ENST00000479197	IQCF2	Q8IXL9	164 aa		13.12	□□□□□ -0.31
RFK-204	ENST00000479197	CSNK1G2-AS1	Q8NCQ2	148 aa		13.12	□□□□□ -0.31
RFK-204	ENST00000479197	MAP1LC3B	Q9GZQ8	125 aa		13.12	□□□□□ -0.31
RFK-204	ENST00000479197	PPP1R14D	Q9NXH3	145 aa		13.12	□□□□□ -0.31
RFK-204	ENST00000479197	BOLA2-SMG1P6	H3BVE0	249 aa		13.11	□□□□□ -0.31
RFK-204	ENST00000479197	FGF8	P55075	233 aa	Predicted RBP	13.11	□□□□□ -0.31
RFK-204	ENST00000479197	FAM74A1	Q5RGS3	127 aa		13.11	□□□□□ -0.31
RFK-204	ENST00000479197	FAM213B	Q8TBF2	198 aa		13.11	□□□□□ -0.31
RFK-204	ENST00000479197	NPIPB6	E9PJ23	425 aa		13.1	□□□□□ -0.31
RFK-204	ENST00000479197		M0R2Z0	102 aa		13.1	□□□□□ -0.31
RFK-204	ENST00000479197	CSN1S1	P47710	185 aa		13.1	□□□□□ -0.31
RFK-204	ENST00000479197	SPINK13	Q1W4C9	94 aa		13.1	□□□□□ -0.31
RFK-204	ENST00000479197	OR11H2	Q8NH07	326 aa		13.1	□□□□□ -0.31
RFK-204	ENST00000479197	RARRES2	Q99969	163 aa		13.1	□□□□□ -0.31
RFK-204	ENST00000479197	PGP	A6NDG6	321 aa		13.09	□□□□□ -0.31
RFK-204	ENST00000479197	AMBP	P02760	352 aa		13.09	□□□□□ -0.31
RFK-204	ENST00000479197	RXFP4	Q8TDU9	374 aa		13.09	□□□□□ -0.31
RFK-204	ENST00000479197	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.08	□□□□□ -0.31
RFK-204	ENST00000479197	IGKV2D-40	P01614	121 aa	Predicted RBP	13.08	□□□□□ -0.31
RFK-204	ENST00000479197	CMTM2	Q8TAZ6	248 aa		13.08	□□□□□ -0.31
RFK-204	ENST00000479197	TMPRSS5	Q9H3S3	457 aa		13.08	□□□□□ -0.31
RFK-204	ENST00000479197	CDKN1B	P46527	198 aa		13.08	□□□□□ -0.32
RFK-204	ENST00000479197	RAB5C	P51148	216 aa		13.08	□□□□□ -0.32
RFK-204	ENST00000479197	ERCC8	Q13216	396 aa		13.08	□□□□□ -0.32
RFK-204	ENST00000479197	C9orf47	Q6ZRZ4	202 aa		13.08	□□□□□ -0.32
RFK-204	ENST00000479197	MBD3L1	Q8WWY6	194 aa		13.08	□□□□□ -0.32
RFK-204	ENST00000479197	IGF2BP2-AS1	Q96M15	143 aa		13.08	□□□□□ -0.32
RFK-204	ENST00000479197	ODF3	Q96PU9	254 aa		13.08	□□□□□ -0.32
RFK-204	ENST00000479197	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.07	□□□□□ -0.32
RFK-204	ENST00000479197	DIRC3	C9JPN6	131 aa		13.07	□□□□□ -0.32
RFK-204	ENST00000479197	CRX	O43186	299 aa	Predicted RBP	13.07	□□□□□ -0.32
RFK-204	ENST00000479197	CT45A10	P0DMU9	189 aa		13.07	□□□□□ -0.32
RFK-204	ENST00000479197	SFT2D1	Q8WV19	159 aa		13.07	□□□□□ -0.32
RFK-204	ENST00000479197	LINC00477	Q96M19	166 aa		13.07	□□□□□ -0.32
RFK-204	ENST00000479197	WWC2-AS2	Q96NR7	200 aa		13.07	□□□□□ -0.32
RFK-204	ENST00000479197	AGPAT4-IT1	Q9H0P7	198 aa		13.07	□□□□□ -0.32
RFK-204	ENST00000479197	EDA2R	Q9HAV5	297 aa		13.07	□□□□□ -0.32
RFK-204	ENST00000479197	TRAV12-2	A0A075B6T6	113 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197		A0A1W2PRE2	83 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	RBAKDN	A6NC62	111 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	INS	P01308	110 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	TSPO	P30536	169 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	SULT1A2	P50226	295 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	TMEM78	Q5T7P6	136 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	LCE2D	Q5TA82	110 aa	Predicted RBP	13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms