RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 BORCS7-ASMTA0A0B4J1R7 106 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 JTBO76095 146 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 KHDC3LQ587J8 217 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 RNF141Q8WVD5 230 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 FXYD5Q96DB9 178 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 PAXXQ9BUH6 204 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 MFFQ9GZY8 342 aa11.21□□□□□ -0.61
C9orf3-217ENST00000479161 TENM2Q9NT68 2774 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 PYYP10082 97 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 ATP6V0CP27449 155 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 HLA-DMBP28068 263 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 ZNF767PQ75MW2 155 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 OR10J6PQ8NGY7 276 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 SLC35B3Q9H1N7 401 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
C9orf3-217ENST00000479161 A0A1W2PPV4 95 aa11.19□□□□□ -0.62
C9orf3-217ENST00000479161 TMEM189A5PLL7 270 aa11.19□□□□□ -0.62
C9orf3-217ENST00000479161 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
C9orf3-217ENST00000479161 ZNF503Q96F45 646 aa11.19□□□□□ -0.62
C9orf3-217ENST00000479161 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
C9orf3-217ENST00000479161 GOLT1BQ9Y3E0 138 aa11.19□□□□□ -0.62
C9orf3-217ENST00000479161 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-217ENST00000479161 OR7C2O60412 319 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 TSPOP30536 169 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-217ENST00000479161 RPL7L1Q6DKI1 246 aaKnown RBP11.18□□□□□ -0.62
C9orf3-217ENST00000479161 TMEM256Q8N2U0 113 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 KCNRGQ8N5I3 272 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 HSD17B11Q8NBQ5 300 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 OR10G4Q8NGN3 311 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
C9orf3-217ENST00000479161 STARD9Q9P2P6 4700 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 A0A0D9SG52 128 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 H3BTX0 84 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 ARPC5O15511 151 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 NMBP08949 121 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 SNRPCP09234 159 aaKnown RBP11.17□□□□□ -0.62
C9orf3-217ENST00000479161 RBMY1A1P0DJD3 496 aaKnown RBP11.17□□□□□ -0.62
C9orf3-217ENST00000479161 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 CDKN1BP46527 198 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
C9orf3-217ENST00000479161 C1orf158Q8N1D5 194 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 RPP25LQ8N5L8 163 aaKnown RBP11.17□□□□□ -0.62
C9orf3-217ENST00000479161 SUN5Q8TC36 379 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 RFNGQ9Y644 331 aa11.17□□□□□ -0.62
C9orf3-217ENST00000479161 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 PRAC2D3DTV9 90 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 INSP01308 110 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 SLC25A5P05141 298 aaKnown RBP11.16□□□□□ -0.62
C9orf3-217ENST00000479161 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 RAB2AP61019 212 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 C9orf47Q6ZRZ4 202 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 BLNKQ8WV28 456 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 CYTL1Q9NRR1 136 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
C9orf3-217ENST00000479161 RBAKDNA6NC62 111 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 NUPR2A6NF83 97 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 M0R3E3 92 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 OR10J4P0C629 311 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 CDC34P49427 236 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-217ENST00000479161 FXYD7P58549 80 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 UBE2L3P68036 154 aaKnown RBP11.15□□□□□ -0.62
C9orf3-217ENST00000479161 ICAM4Q14773 271 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 SLC7A5P1Q8MH63 180 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 C9orf62Q8N4C0 152 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 OR11H4Q8NGC9 324 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 RXFP4Q8TDU9 374 aa11.15□□□□□ -0.62
C9orf3-217ENST00000479161 DYNC2H1Q8NCM8 4307 aaKnown RBP11.14□□□□□ -0.63
C9orf3-217ENST00000479161 TEX48A0A1B0GUV7 120 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 M0R2Z0 102 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 HBE1P02100 147 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 EXOC3-AS1Q8N2X6 119 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 PHYHIPLQ96FC7 376 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 FAM19A4Q96LR4 140 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 ARPC5LQ9BPX5 153 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-217ENST00000479161 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
C9orf3-217ENST00000479161 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 CT45A10P0DMU9 189 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 LEPP41159 167 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 CSN1S1P47710 185 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 RRN3P1Q2M238 152 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 FAM74A1Q5RGS3 127 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 FAM122CQ6P4D5 195 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 CEMP1Q6PRD7 247 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-217ENST00000479161 SH3BGRL3Q9H299 93 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 Q9H3A6 140 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 OTORQ9NRC9 128 aa11.13□□□□□ -0.63
C9orf3-217ENST00000479161 LENEPQ9Y5L5 61 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms