RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 RNF152Q8N8N0 203 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 TMEM160Q9NX00 188 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 SMIM27A0A1W2PRY6 76 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 LINC01548A6NM66 108 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 DIRC3C9JPN6 131 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 NPIPB6E9PJ23 425 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 PHOX2AO14813 284 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 GATCO43716 136 aaKnown RBP5.14□□□□□ -1.59
LDB3-206ENST00000477489 IGHV4-59P01825 116 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 HNF1AP20823 631 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 BLCAPP62952 87 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 PSG3Q16557 428 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 COA6Q5JTJ3 125 aaKnown RBP5.14□□□□□ -1.59
LDB3-206ENST00000477489 ACTL10Q5JWF8 245 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 LEMD1Q68G75 181 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 Q6AWC8 147 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 GPHB5Q86YW7 130 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 CIARTQ8N365 385 aaPredicted RBP5.14□□□□□ -1.59
LDB3-206ENST00000477489 MYOZ3Q8TDC0 251 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 WIPF2Q8TF74 440 aaPredicted RBP5.14□□□□□ -1.59
LDB3-206ENST00000477489 GNB1LQ9BYB4 327 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 GNB4Q9HAV0 340 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 ZNF331Q9NQX6 463 aaPredicted RBP5.14□□□□□ -1.59
LDB3-206ENST00000477489 PPP1R14DQ9NXH3 145 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 NAT8BQ9UHF3 227 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 CSPG4Q6UVK1 2322 aa5.14□□□□□ -1.59
LDB3-206ENST00000477489 A0A1B0GW15 77 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 ZNF320A2RRD8 509 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 CLPSL1A2RUU4 121 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 C19orf71A6NCJ1 209 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 IZUMO1RA6ND01 250 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 PGPEP1LA6NFU8 196 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 ZNF705GA8MUZ8 300 aaPredicted RBP5.13□□□□□ -1.59
LDB3-206ENST00000477489 A8MWL6 223 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 CD5LO43866 347 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BKO60814 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 IGLV2-11P01706 119 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 TRGC2P03986 189 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BJP06899 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 CT45A10P0DMU9 189 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 MGST1P10620 155 aaKnown RBP5.13□□□□□ -1.59
LDB3-206ENST00000477489 PF4V1P10720 104 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BOP23527 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BBP33778 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 FOXA3P55318 350 aaPredicted RBP5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BDP58876 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BCP62807 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 GNG5P63218 68 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 SRSF2Q01130 221 aaKnown RBP5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST2H2BEQ16778 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 FAM106AQ4KMX7 169 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.13□□□□□ -1.59
LDB3-206ENST00000477489 C16orf54Q6UWD8 224 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 OR4X2Q8NGF9 303 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 TSKUQ8WUA8 353 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BHQ93079 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 DAZAP1Q96EP5 407 aaKnown RBP5.13□□□□□ -1.59
LDB3-206ENST00000477489 UBE2E2Q96LR5 201 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 MS4A10Q96PG2 267 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BNQ99877 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 HIST1H2BMQ99879 126 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 NDFIP1Q9BT67 221 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 PEF1Q9UBV8 284 aaKnown RBP5.13□□□□□ -1.59
LDB3-206ENST00000477489 PSG8Q9UQ74 426 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 UFC1Q9Y3C8 167 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 LENEPQ9Y5L5 61 aa5.13□□□□□ -1.59
LDB3-206ENST00000477489 TRBV7-9A0A0J9YWB2 115 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 XKRY2A2RUG3 117 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 SH2D7A6NKC9 451 aaPredicted RBP5.12□□□□□ -1.59
LDB3-206ENST00000477489 ZNF785A8K8V0 405 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 LGALS9O00182 355 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 P01737 135 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 IGHV3-23P01764 117 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 HLA-DQA1P01909 254 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 HOXA5P20719 270 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 CDX1P47902 265 aaPredicted RBP5.12□□□□□ -1.59
LDB3-206ENST00000477489 RPS20P60866 119 aaKnown RBP5.12□□□□□ -1.59
LDB3-206ENST00000477489 GOLT1AQ6ZVE7 132 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 REC114Q7Z4M0 266 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 PRIMA1Q86XR5 153 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 BCL6BQ8N143 479 aaPredicted RBP5.12□□□□□ -1.59
LDB3-206ENST00000477489 EXOC3-AS1Q8N2X6 119 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 GBGT1Q8N5D6 347 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 NUDT10Q8NFP7 164 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 GLMPQ8WWB7 406 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 NUDT11Q96G61 164 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 RPP21Q9H633 154 aaKnown RBP5.12□□□□□ -1.59
LDB3-206ENST00000477489 DAZ1Q9NQZ3 744 aaKnown RBP5.12□□□□□ -1.59
LDB3-206ENST00000477489 TRAPPC1Q9Y5R8 145 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 S4R3C0 116 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 DCHS2Q6V1P9 2916 aa5.12□□□□□ -1.59
LDB3-206ENST00000477489 TRAV34A0A0B4J273 112 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 A8MWP6 167 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 SLC17A3O00476 420 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 CHEK1O14757 476 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 LGALS1P09382 135 aaKnown RBP5.11□□□□□ -1.59
LDB3-206ENST00000477489 TRGC1P0CF51 173 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 SNRPEP62304 92 aaKnown RBP5.11□□□□□ -1.59
LDB3-206ENST00000477489 OR5I1Q13606 314 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms