RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 GAGE12FP0CL80 117 aa15□□□□□ -0.01
VARS2-209ENST00000477288 GAGE12GP0CL81 117 aa15□□□□□ -0.01
VARS2-209ENST00000477288 GAGE12IP0CL82 117 aa15□□□□□ -0.01
VARS2-209ENST00000477288 AZU1P20160 251 aa15□□□□□ -0.01
VARS2-209ENST00000477288 PAX9P55771 341 aa15□□□□□ -0.01
VARS2-209ENST00000477288 CR1LQ2VPA4 569 aa15□□□□□ -0.01
VARS2-209ENST00000477288 ZNF581Q9P0T4 197 aa15□□□□□ -0.01
VARS2-209ENST00000477288 NMSQ5H8A3 153 aa15□□□□□ -0.01
VARS2-209ENST00000477288 C8orf49Q96NF6 230 aa15□□□□□ -0.01
VARS2-209ENST00000477288 E9PQ18 207 aa15□□□□□ -0.01
VARS2-209ENST00000477288 COX11Q9Y6N1 276 aa15□□□□□ -0.01
VARS2-209ENST00000477288 RNASE2P10153 161 aaKnown RBP15□□□□□ -0.01
VARS2-209ENST00000477288 THAP8Q8NA92 274 aa15□□□□□ -0.01
VARS2-209ENST00000477288 IGHV3-38A0A0C4DH36 116 aa15□□□□□ -0.01
VARS2-209ENST00000477288 ANK1P16157 1881 aa15□□□□□ -0.01
VARS2-209ENST00000477288 RNF144BQ7Z419 303 aa14.99□□□□□ -0.01
VARS2-209ENST00000477288 LINC00479Q96M42 142 aa14.99□□□□□ -0.01
VARS2-209ENST00000477288 A0A096LPF7 62 aa14.99□□□□□ -0.01
VARS2-209ENST00000477288 EREGO14944 169 aa14.99□□□□□ -0.01
VARS2-209ENST00000477288 GAGE6Q13070 117 aa14.99□□□□□ -0.01
VARS2-209ENST00000477288 MED12Q93074 2177 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 ANXA2RQ3ZCQ2 193 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 SOCS3O14543 225 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 HAPLN4Q86UW8 402 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 STPG4Q8N801 248 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 COLCA2A8K830 154 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 TCF15Q12870 199 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 NBASA2RRP1 2371 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 ROS1P08922 2347 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 TMEM213A2RRL7 107 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 C15orf62A8K5M9 175 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 CFHR2P36980 270 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 SHANK2-AS3Q9BTD1 123 aa14.98□□□□□ -0.01
VARS2-209ENST00000477288 TRAV1-1A0A0B4J248 108 aa14.97□□□□□ -0.01
VARS2-209ENST00000477288 C1orf194Q5T5A4 169 aa14.97□□□□□ -0.01
VARS2-209ENST00000477288 KIF26BQ2KJY2 2108 aa14.97□□□□□ -0.01
VARS2-209ENST00000477288 H3BMM0 161 aa14.97□□□□□ -0.01
VARS2-209ENST00000477288 UBE2WQ96B02 151 aa14.97□□□□□ -0.01
VARS2-209ENST00000477288 MST1LQ2TV78 715 aa14.96□□□□□ -0.01
VARS2-209ENST00000477288 ADAMTSL5Q6ZMM2 481 aa14.96□□□□□ -0.01
VARS2-209ENST00000477288 TRBV6-6A0A0A6YYG2 114 aa14.96□□□□□ -0.01
VARS2-209ENST00000477288 G3V318 75 aa14.96□□□□□ -0.01
VARS2-209ENST00000477288 APOC4P55056 127 aa14.96□□□□□ -0.01
VARS2-209ENST00000477288 CACNA1HO95180 2353 aa14.96□□□□□ -0.01
VARS2-209ENST00000477288 SPTAN1Q13813 2472 aaKnown RBP14.96□□□□□ -0.01
VARS2-209ENST00000477288 KLF5Q13887 457 aaPredicted RBP14.96□□□□□ -0.01
VARS2-209ENST00000477288 SRSF8Q9BRL6 282 aaKnown RBP14.96□□□□□ -0.01
VARS2-209ENST00000477288 TRAV12-2A0A075B6T6 113 aa14.96□□□□□ -0.02
VARS2-209ENST00000477288 A0A1W2PPI3 338 aa14.96□□□□□ -0.02
VARS2-209ENST00000477288 SPINK8P0C7L1 97 aa14.96□□□□□ -0.02
VARS2-209ENST00000477288 MMP23AO75900 390 aa14.95□□□□□ -0.02
VARS2-209ENST00000477288 NDUFB8O95169 186 aa14.95□□□□□ -0.02
VARS2-209ENST00000477288 ZNRF2Q8NHG8 242 aa14.95□□□□□ -0.02
VARS2-209ENST00000477288 THSD7BQ9C0I4 1608 aa14.95□□□□□ -0.02
VARS2-209ENST00000477288 IGHV2-70DA0A0C4DH43 119 aa14.95□□□□□ -0.02
VARS2-209ENST00000477288 CD5LO43866 347 aa14.95□□□□□ -0.02
VARS2-209ENST00000477288 SBF1O95248 1867 aa14.95□□□□□ -0.02
VARS2-209ENST00000477288 I3L3M4 83 aa14.94□□□□□ -0.02
VARS2-209ENST00000477288 A0A1B0GW64 132 aa14.94□□□□□ -0.02
VARS2-209ENST00000477288 HAMPP81172 84 aa14.94□□□□□ -0.02
VARS2-209ENST00000477288 MRAPQ8TCY5 172 aa14.94□□□□□ -0.02
VARS2-209ENST00000477288 LY96Q9Y6Y9 160 aa14.94□□□□□ -0.02
VARS2-209ENST00000477288 SCRT2Q9NQ03 307 aa14.94□□□□□ -0.02
VARS2-209ENST00000477288 A0A0G2JRQ6 117 aa14.93□□□□□ -0.02
VARS2-209ENST00000477288 CLPSL2Q6UWE3 100 aa14.93□□□□□ -0.02
VARS2-209ENST00000477288 MRPL27Q9P0M9 148 aaKnown RBP14.93□□□□□ -0.02
VARS2-209ENST00000477288 TAL2Q16559 108 aa14.93□□□□□ -0.02
VARS2-209ENST00000477288 TRAV26-2A0A0B4J265 109 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 TCTEX1D4Q5JR98 221 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 RHODO00212 210 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 NDUFS5O43920 106 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 VWC2Q2TAL6 325 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 POLEQ07864 2286 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 VWA8A3KMH1 1905 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 HS3ST6Q96QI5 342 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 TMEM243Q9BU79 118 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 NEGR1Q7Z3B1 354 aa14.92□□□□□ -0.02
VARS2-209ENST00000477288 MORN5Q5VZ52 161 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 SIP14410 1827 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 PRSS29PA6NIE9 313 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 TMEM75Q8N9X5 138 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 ZMAT4Q9H898 229 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 CRLF1O75462 422 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 C9orf153Q5TBE3 101 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 C2orf66Q6UXQ4 117 aa14.91□□□□□ -0.02
VARS2-209ENST00000477288 COL6A6A6NMZ7 2263 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 TRAV12-1A0A0B4J245 112 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 DLEU1O43261 78 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 PFN1P07737 140 aaKnown RBP14.9□□□□□ -0.02
VARS2-209ENST00000477288 TMEM141Q96I45 108 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 IGHV1OR15-1A0A075B7D0 117 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 PDE6HQ13956 83 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 IGF2BP2-AS1Q96M15 143 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 GFRA4Q9GZZ7 299 aa14.9□□□□□ -0.02
VARS2-209ENST00000477288 C22orf46C9J442 243 aa14.89□□□□□ -0.03
VARS2-209ENST00000477288 FREM3P0C091 2139 aa14.89□□□□□ -0.03
VARS2-209ENST00000477288 ZNF124Q15973 351 aa14.89□□□□□ -0.03
VARS2-209ENST00000477288 RMI2Q96E14 147 aa14.89□□□□□ -0.03
VARS2-209ENST00000477288 HLA-DRB4P13762 266 aa14.88□□□□□ -0.03
VARS2-209ENST00000477288 HLA-DRB4X5D2U9 266 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms