RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 HEATR1Q9H583 2144 aaKnown RBP12.07□□□□□ -0.48
CLSTN1-205ENST00000477264 SERTM2A0A1B0GWG4 89 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 EVI2AP22794 236 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 LINC00311Q8N616 119 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 MRAP2Q96G30 205 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 CLUHP3Q96NS8 147 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 VKORC1Q9BQB6 163 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 CKS1BP61024 79 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 MRPL51Q4U2R6 128 aaKnown RBP12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
CLSTN1-205ENST00000477264 SPTA1P02549 2419 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 H3BTX0 84 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 MC5RP33032 325 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 RAB9AP51151 201 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 DUX4L9Q6RFH8 374 aaPredicted RBP12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 NAV3Q8IVL0 2385 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 TRBV19A0A075B6N1 114 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 SLC25A17O43808 307 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 ATP5LO75964 103 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 TNFRSF1AP19438 455 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 GLRXP35754 106 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 LYZP61626 148 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 PLGLAQ15195 96 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 MSMPQ1L6U9 139 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 SPRNQ5BIV9 151 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 EXOC3-AS1Q8N2X6 119 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 ZNF479Q96JC4 524 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 NGBQ9NPG2 151 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 SLC25A15Q9Y619 301 aa12.05□□□□□ -0.48
CLSTN1-205ENST00000477264 WI2-2373I1.2A0A1W2PRP0 233 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 IGLL5B9A064 214 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 SPRY3O43610 288 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 FAM27E3Q08E93 113 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 ODF1Q14990 250 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 LYZL1Q6UWQ5 148 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 CCL13Q99616 98 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 MAP1LC3AQ9H492 121 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 NHP2Q9NX24 153 aaKnown RBP12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 ZNRD1Q9P1U0 126 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 DKK2Q9UBU2 259 aa12.04□□□□□ -0.48
CLSTN1-205ENST00000477264 IGKCP01834 107 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 RPL27AP46776 148 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 FAM201AQ5SY85 155 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 TPPP3Q9BW30 176 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 NXT2Q9NPJ8 142 aaKnown RBP12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 TRBV25-1A0A075B6N4 114 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 CKS2P33552 79 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 TWIST1Q15672 202 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 SIGLEC15Q6ZMC9 328 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 COX8CQ7Z4L0 72 aa12.03□□□□□ -0.48
CLSTN1-205ENST00000477264 LINC01619G3V211 115 aa12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 FCER1GP30273 86 aa12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 TNFAIP6P98066 277 aaPredicted RBP12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 KLF17Q5JT82 389 aaPredicted RBP12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 S100A7AQ86SG5 101 aa12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 SPAG8Q99932 426 aaPredicted RBP12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 SHANK2-AS3Q9BTD1 123 aa12.02□□□□□ -0.48
CLSTN1-205ENST00000477264 TMEM213A2RRL7 107 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 C16orf97H3BN30 126 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 H3BRN7 92 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 DPM2O94777 84 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 NPYP01303 97 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 CRIP1P50238 77 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 WFDC2Q14508 124 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 ZNF562Q6V9R5 426 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
CLSTN1-205ENST00000477264 K7ERJ3 54 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 M0R1B8 84 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 TCTAP57738 103 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 PDE6HQ13956 83 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 HCP5Q6MZN7 132 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 LCNL1Q6ZST4 164 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 MRPL16Q9NX20 251 aaKnown RBP12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 ATRXP46100 2492 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 IGKV2D-26A0A0A0MRZ7 120 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 CCL21O00585 134 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 MRGPRG-AS1Q2M3A8 158 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 C18orf15Q96N68 181 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 RASL11BQ9BPW5 248 aa12.01□□□□□ -0.49
CLSTN1-205ENST00000477264 ITPR1Q14643 2758 aa12□□□□□ -0.49
CLSTN1-205ENST00000477264 SRSF2Q01130 221 aaKnown RBP12□□□□□ -0.49
CLSTN1-205ENST00000477264 RUSC1-AS1Q66K80 236 aa12□□□□□ -0.49
CLSTN1-205ENST00000477264 NPIPB5A8MRT5 1133 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 Q71RC1 249 aaPredicted RBP11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 DEFB108BQ8NET1 73 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 ARPC1AQ92747 370 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 PRSS47A8MTI9 375 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 SH2D1AO60880 128 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 RRN3P1Q2M238 152 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 601.2 ms