RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 HMGB3O15347 200 aaKnown RBP12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 SEC11BP0C7V7 166 aa12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 TPT1P13693 172 aaKnown RBP12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 AKR1C8PQ5T2L2 129 aa12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 GDF5OSQ5U4N7 250 aa12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 BLNKQ8WV28 456 aa12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 ACTR3CQ9C0K3 210 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 SAV1Q9H4B6 383 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-210ENST00000477169 CXorf65A6NEN9 183 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 F6UB75 175 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 H3BMM0 161 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 STAG3L2P0CL84 134 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 STAG3L3P0CL85 134 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 NKX2-5P52952 324 aaPredicted RBP12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 UBE2L3P68036 154 aaKnown RBP12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 PDE6HQ13956 83 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 ZNF726P1Q15940 193 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 SSX7Q7RTT5 188 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 ZNF738Q8NE65 137 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
SMARCD3-210ENST00000477169 A0A0J9YX75 114 aa12.57□□□□□ -0.4
SMARCD3-210ENST00000477169 NUPR2A6NF83 97 aa12.57□□□□□ -0.4
SMARCD3-210ENST00000477169 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
SMARCD3-210ENST00000477169 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
SMARCD3-210ENST00000477169 CLEC5AQ9NY25 188 aa12.57□□□□□ -0.4
SMARCD3-210ENST00000477169 ALMS1Q8TCU4 4167 aa12.57□□□□□ -0.4
SMARCD3-210ENST00000477169 ZNF705FA8MVS1 300 aaPredicted RBP12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 PSG9Q00887 426 aa12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 EBLN2Q6P2I7 272 aa12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 CEMP1Q6PRD7 247 aaPredicted RBP12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 SLC51BQ86UW2 128 aa12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 TMED6Q8WW62 240 aa12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 RPUSD4Q96CM3 377 aaKnown RBP12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 PHYHIPLQ96FC7 376 aa12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 RARRES2Q99969 163 aa12.56□□□□□ -0.4
SMARCD3-210ENST00000477169 CTXND1A0A1B0GTU2 59 aa12.55□□□□□ -0.4
SMARCD3-210ENST00000477169 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
SMARCD3-210ENST00000477169 C4BPBP20851 252 aa12.55□□□□□ -0.4
SMARCD3-210ENST00000477169 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
SMARCD3-210ENST00000477169 BIRC6Q9NR09 4857 aa12.55□□□□□ -0.4
SMARCD3-210ENST00000477169 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 PRAC2D3DTV9 90 aa12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 ZNF705DP0CH99 300 aaPredicted RBP12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 ZNF705BP0CI00 300 aaPredicted RBP12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 GCHFRP30047 84 aa12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 FHITP49789 147 aa12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 OR8A1Q8NGG7 326 aa12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 CLUHP3Q96NS8 147 aa12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
SMARCD3-210ENST00000477169 A8MTW9 85 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 M0R3E3 92 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 CXorf1O96002 111 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 IGKV3-20P01619 116 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 GIG44P09565 113 aaPredicted RBP12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 RANP62826 216 aaKnown RBP12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 ICAM4Q14773 271 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 MORN3Q6PF18 240 aaPredicted RBP12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 OR4B1Q8NGF8 309 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 SUN5Q8TC36 379 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 LINC00476Q8WZB0 136 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 KLK5Q9Y337 293 aaPredicted RBP12.53□□□□□ -0.4
SMARCD3-210ENST00000477169 DUSP14O95147 198 aaKnown RBP12.52□□□□□ -0.41
SMARCD3-210ENST00000477169 CA1P00915 261 aaPredicted RBP12.52□□□□□ -0.41
SMARCD3-210ENST00000477169 CNN1P51911 297 aaKnown RBP12.52□□□□□ -0.41
SMARCD3-210ENST00000477169 LYPD1Q8N2G4 141 aa12.52□□□□□ -0.41
SMARCD3-210ENST00000477169 OR11H2Q8NH07 326 aa12.52□□□□□ -0.41
SMARCD3-210ENST00000477169 Q9H3A6 140 aa12.52□□□□□ -0.41
SMARCD3-210ENST00000477169 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
SMARCD3-210ENST00000477169 FGF8P55075 233 aaPredicted RBP12.51□□□□□ -0.41
SMARCD3-210ENST00000477169 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
SMARCD3-210ENST00000477169 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
SMARCD3-210ENST00000477169 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
SMARCD3-210ENST00000477169 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
SMARCD3-210ENST00000477169 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
SMARCD3-210ENST00000477169 C11orf68Q9H3H3 251 aaKnown RBP12.51□□□□□ -0.41
SMARCD3-210ENST00000477169 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
SMARCD3-210ENST00000477169 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
SMARCD3-210ENST00000477169 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
SMARCD3-210ENST00000477169 TMPRSS5Q9H3S3 457 aa12.5□□□□□ -0.41
SMARCD3-210ENST00000477169 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
SMARCD3-210ENST00000477169 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
SMARCD3-210ENST00000477169 PGPA6NDG6 321 aa12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 LY6G6CO95867 125 aa12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 FXYD7P58549 80 aa12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 NUTF2P61970 127 aaKnown RBP12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 IQCF2Q8IXL9 164 aa12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 OR10J6PQ8NGY7 276 aa12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 SLC35B3Q9H1N7 401 aa12.49□□□□□ -0.41
SMARCD3-210ENST00000477169 BOLA2-SMG1P6H3BVE0 249 aa12.48□□□□□ -0.41
SMARCD3-210ENST00000477169 SULT1A2P50226 295 aa12.48□□□□□ -0.41
SMARCD3-210ENST00000477169 RAB5CP51148 216 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms