RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	GUK1	Q16774	197 aa		13.63	□□□□□ -0.23
GMDS-204	ENST00000476972	RRN3P1	Q2M238	152 aa		13.63	□□□□□ -0.23
GMDS-204	ENST00000476972	WDR61	Q9GZS3	305 aa	Known RBP	13.63	□□□□□ -0.23
GMDS-204	ENST00000476972	SPART-AS1	P0CW21	52 aa		13.62	□□□□□ -0.23
GMDS-204	ENST00000476972	PPP1R14D	Q9NXH3	145 aa		13.62	□□□□□ -0.23
GMDS-204	ENST00000476972	ZNF586	Q9NXT0	402 aa		13.62	□□□□□ -0.23
GMDS-204	ENST00000476972	MBD2	Q9UBB5	411 aa		13.62	□□□□□ -0.23
GMDS-204	ENST00000476972	DKK2	Q9UBU2	259 aa		13.62	□□□□□ -0.23
GMDS-204	ENST00000476972	HSPB11	Q9Y547	144 aa		13.62	□□□□□ -0.23
GMDS-204	ENST00000476972	FAT2	Q9NYQ8	4349 aa		13.61	□□□□□ -0.23
GMDS-204	ENST00000476972	PRAC2	D3DTV9	90 aa		13.61	□□□□□ -0.23
GMDS-204	ENST00000476972	FAM222A	Q5U5X8	452 aa		13.61	□□□□□ -0.23
GMDS-204	ENST00000476972	ATP5S	Q99766	215 aa		13.61	□□□□□ -0.23
GMDS-204	ENST00000476972	KCNIP2	Q9NS61	270 aa		13.61	□□□□□ -0.23
GMDS-204	ENST00000476972	TMEM14C	Q9P0S9	112 aa		13.61	□□□□□ -0.23
GMDS-204	ENST00000476972	DNAH6	Q9C0G6	4158 aa		13.61	□□□□□ -0.23
GMDS-204	ENST00000476972	TRBV19	A0A075B6N1	114 aa		13.6	□□□□□ -0.23
GMDS-204	ENST00000476972	DEFB131B	A0A096LNP1	70 aa		13.6	□□□□□ -0.23
GMDS-204	ENST00000476972	ZNF253	O75346	499 aa		13.6	□□□□□ -0.23
GMDS-204	ENST00000476972	PYY	P10082	97 aa		13.6	□□□□□ -0.23
GMDS-204	ENST00000476972	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.6	□□□□□ -0.23
GMDS-204	ENST00000476972	IGHV4-4	A0A075B6R2	117 aa		13.59	□□□□□ -0.23
GMDS-204	ENST00000476972	TEX48	A0A1B0GUV7	120 aa		13.59	□□□□□ -0.23
GMDS-204	ENST00000476972	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.59	□□□□□ -0.23
GMDS-204	ENST00000476972	PRM2	P04554	102 aa		13.59	□□□□□ -0.23
GMDS-204	ENST00000476972	RPL12	P30050	165 aa	Known RBP	13.59	□□□□□ -0.23
GMDS-204	ENST00000476972	OR10J6P	Q8NGY7	276 aa		13.59	□□□□□ -0.23
GMDS-204	ENST00000476972	SLC25A2	Q9BXI2	301 aa		13.59	□□□□□ -0.23
GMDS-204	ENST00000476972	DNAH17	Q9UFH2	4485 aa		13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	HIST1H1E	P10412	219 aa	Known RBP	13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	CDKN1B	P46527	198 aa		13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	MIR17HG	Q75NE6	70 aa		13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	FAM167A-AS1	Q96KT0	104 aa		13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	NIPSNAP3B	Q9BS92	247 aa		13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	SMIM3	Q9BZL3	60 aa		13.58	□□□□□ -0.24
GMDS-204	ENST00000476972	C17orf112	F2Z3M2	114 aa		13.57	□□□□□ -0.24
GMDS-204	ENST00000476972	NDUFB4	O95168	129 aa		13.57	□□□□□ -0.24
GMDS-204	ENST00000476972	PDE6H	Q13956	83 aa		13.57	□□□□□ -0.24
GMDS-204	ENST00000476972	BLNK	Q8WV28	456 aa		13.57	□□□□□ -0.24
GMDS-204	ENST00000476972	PLA2G2E	Q9NZK7	142 aa		13.57	□□□□□ -0.24
GMDS-204	ENST00000476972		M0R3E3	92 aa		13.56	□□□□□ -0.24
GMDS-204	ENST00000476972	KIR3DS1	Q14943	382 aa		13.56	□□□□□ -0.24
GMDS-204	ENST00000476972	TMEM256	Q8N2U0	113 aa		13.56	□□□□□ -0.24
GMDS-204	ENST00000476972	MRPL53	Q96EL3	112 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-204	ENST00000476972	MRPL32	Q9BYC8	188 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-204	ENST00000476972	TIMM9	Q9Y5J7	89 aa		13.56	□□□□□ -0.24
GMDS-204	ENST00000476972	RYR1	P21817	5038 aa		13.55	□□□□□ -0.24
GMDS-204	ENST00000476972	NPIPB6	E9PJ23	425 aa		13.55	□□□□□ -0.24
GMDS-204	ENST00000476972	IFNA5	P01569	189 aa		13.55	□□□□□ -0.24
GMDS-204	ENST00000476972	TSPO	P30536	169 aa		13.55	□□□□□ -0.24
GMDS-204	ENST00000476972	FCN2	Q15485	313 aa		13.55	□□□□□ -0.24
GMDS-204	ENST00000476972	LINC01587	Q99440	93 aa		13.55	□□□□□ -0.24
GMDS-204	ENST00000476972	FUT9	Q9Y231	359 aa		13.55	□□□□□ -0.24
GMDS-204	ENST00000476972	CT45A10	P0DMU9	189 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	AZU1	P20160	251 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	TAS2R60	P59551	318 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	OXA1L	Q15070	435 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	FFAR4	Q5NUL3	377 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	GFI1B	Q5VTD9	330 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	EXOC3-AS1	Q8N2X6	119 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	SCGB1C1	Q8TD33	95 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	MED28	Q9H204	178 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	WFDC1	Q9HC57	220 aa		13.54	□□□□□ -0.24
GMDS-204	ENST00000476972	PLAC8L1	A1L4L8	177 aa		13.53	□□□□□ -0.24
GMDS-204	ENST00000476972	DAD1	P61803	113 aa		13.53	□□□□□ -0.24
GMDS-204	ENST00000476972	ODF3	Q96PU9	254 aa		13.53	□□□□□ -0.24
GMDS-204	ENST00000476972	PAXX	Q9BUH6	204 aa		13.53	□□□□□ -0.24
GMDS-204	ENST00000476972	OR51M1	Q9H341	326 aa		13.53	□□□□□ -0.24
GMDS-204	ENST00000476972	PRELID1	Q9Y255	219 aa		13.53	□□□□□ -0.24
GMDS-204	ENST00000476972	DNAH11	Q96DT5	4516 aa		13.53	□□□□□ -0.24
GMDS-204	ENST00000476972		J3KRW8	73 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	OR10J4	P0C629	311 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	HTN1	P15515	57 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	HTN3	P15516	51 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	ICAM4	Q14773	271 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	LINC00336	Q6ZUF6	198 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	FXYD5	Q96DB9	178 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	C20orf144	Q9BQM9	153 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	NDUFAF3	Q9BU61	184 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	AAMDC	Q9H7C9	122 aa		13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	DYNC1H1	Q14204	4646 aa	Known RBP	13.52	□□□□□ -0.25
GMDS-204	ENST00000476972	LYRM9	A8MSI8	78 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972		H7BYZ3	331 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972	OR7C2	O60412	319 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972	NBEAP1	P0C6P0	100 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972	LEP	P41159	167 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972	ERCC8	Q13216	396 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972	PHYHIPL	Q96FC7	376 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972	C16orf74	Q96GX8	76 aa		13.51	□□□□□ -0.25
GMDS-204	ENST00000476972	FAM122C	Q6P4D5	195 aa		13.5	□□□□□ -0.25
GMDS-204	ENST00000476972	RNASE8	Q8TDE3	154 aa	Known RBP	13.5	□□□□□ -0.25
GMDS-204	ENST00000476972	RNF141	Q8WVD5	230 aa		13.5	□□□□□ -0.25
GMDS-204	ENST00000476972	ZNF503	Q96F45	646 aa		13.5	□□□□□ -0.25
GMDS-204	ENST00000476972	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.49	□□□□□ -0.25
GMDS-204	ENST00000476972		A0A1B0GVY2	172 aa		13.49	□□□□□ -0.25
GMDS-204	ENST00000476972	IGKV2D-40	P01614	121 aa	Predicted RBP	13.49	□□□□□ -0.25
GMDS-204	ENST00000476972	UBE2L3	P68036	154 aa	Known RBP	13.49	□□□□□ -0.25
GMDS-204	ENST00000476972	TMEM263	Q8WUH6	116 aa	Known RBP	13.49	□□□□□ -0.25
GMDS-204	ENST00000476972	PKHD1	P08F94	4074 aa		13.49	□□□□□ -0.25

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