RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 OR5AC2Q9NZP5 309 aa7.35□□□□□ -1.23
CCM2-208ENST00000476594 TMEM14CQ9P0S9 112 aa7.35□□□□□ -1.23
CCM2-208ENST00000476594 DNAH1Q9P2D7 4330 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 IGHV4-4A0A075B6R2 117 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 LYRM9A8MSI8 78 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 H2BFSP57053 126 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 DAD1P61803 113 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 FAM222AQ5U5X8 452 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 C1orf158Q8N1D5 194 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 LINC01587Q99440 93 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 WDR61Q9GZS3 305 aaKnown RBP7.34□□□□□ -1.23
CCM2-208ENST00000476594 DKK2Q9UBU2 259 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 CELA1Q9UNI1 258 aa7.34□□□□□ -1.23
CCM2-208ENST00000476594 YTHDF2Q9Y5A9 579 aaKnown RBP7.34□□□□□ -1.23
CCM2-208ENST00000476594 H7BYZ3 331 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 RPL12P30050 165 aaKnown RBP7.33□□□□□ -1.24
CCM2-208ENST00000476594 LEPP41159 167 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 TAS2R45P59539 299 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 TAS2R60P59551 318 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 C12orf74Q32Q52 190 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 ZNF493Q6ZR52 646 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 CCDC28AQ8IWP9 274 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 BAP18Q8IXM2 172 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 ASB13Q8WXK3 278 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 ODF3Q96PU9 254 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 HSPB11Q9Y547 144 aa7.33□□□□□ -1.24
CCM2-208ENST00000476594 BIRC6Q9NR09 4857 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 TRBV19A0A075B6N1 114 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 TRAV12-2A0A075B6T6 113 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 TRAV5A0A0B4J249 113 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 H0YIZ8 118 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 H3BQ15 152 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 SLC17A3O00476 420 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 P0DMU3 169 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 FAM231AP0DMU4 169 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 FAM231CP0DMU5 169 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 ZNF266Q14584 549 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 MORN5Q5VZ52 161 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 RPP25LQ8N5L8 163 aaKnown RBP7.32□□□□□ -1.24
CCM2-208ENST00000476594 SAT2Q96F10 170 aaPredicted RBP7.32□□□□□ -1.24
CCM2-208ENST00000476594 MED28Q9H204 178 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 OR51M1Q9H341 326 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 MBD2Q9UBB5 411 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 FUT9Q9Y231 359 aa7.32□□□□□ -1.24
CCM2-208ENST00000476594 H3BTX0 84 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 CRXO43186 299 aaPredicted RBP7.31□□□□□ -1.24
CCM2-208ENST00000476594 OR7C2O60412 319 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 SNRPCP09234 159 aaKnown RBP7.31□□□□□ -1.24
CCM2-208ENST00000476594 CSN1S1P47710 185 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 KHDC3LQ587J8 217 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 ZNF767PQ75MW2 155 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 BLNKQ8WV28 456 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 LINC00477Q96M19 166 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 PAXXQ9BUH6 204 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 PARD6GQ9BYG4 376 aaPredicted RBP7.31□□□□□ -1.24
CCM2-208ENST00000476594 ZNF586Q9NXT0 402 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 ALG5Q9Y673 324 aa7.31□□□□□ -1.24
CCM2-208ENST00000476594 ZNF705GA8MUZ8 300 aaPredicted RBP7.3□□□□□ -1.24
CCM2-208ENST00000476594 NPIPB6E9PJ23 425 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 NBEAP1P0C6P0 100 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 HTN1P15515 57 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 HTN3P15516 51 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 ACOT6Q3I5F7 207 aaPredicted RBP7.3□□□□□ -1.24
CCM2-208ENST00000476594 FFAR4Q5NUL3 377 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 FAM74A1Q5RGS3 127 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 TMEM78Q5T7P6 136 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 LYPD1Q8N2G4 141 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 C15orf53Q8NAA6 179 aa7.3□□□□□ -1.24
CCM2-208ENST00000476594 TMEM263Q8WUH6 116 aaKnown RBP7.3□□□□□ -1.24
CCM2-208ENST00000476594 TIMM8BQ9Y5J9 83 aaPredicted RBP7.3□□□□□ -1.24
CCM2-208ENST00000476594 EPPK1P58107 5090 aaKnown RBP7.29□□□□□ -1.24
CCM2-208ENST00000476594 A0A1W2PPV4 95 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 SNURFLB1AK76 121 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 SLC25A5P05141 298 aaKnown RBP7.29□□□□□ -1.24
CCM2-208ENST00000476594 PYYP10082 97 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 UBE2L3P68036 154 aaKnown RBP7.29□□□□□ -1.24
CCM2-208ENST00000476594 GCSAMLQ5JQS6 135 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 MIR17HGQ75NE6 70 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 UBE2DNLQ8IWF7 75 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 RNF141Q8WVD5 230 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 SLC25A2Q9BXI2 301 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 SMIM3Q9BZL3 60 aa7.29□□□□□ -1.24
CCM2-208ENST00000476594 ATP5G1P05496 136 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 NMBP08949 121 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 M6PRP20645 277 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 ATP5G3P48201 142 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 ICAM4Q14773 271 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 RGS21Q2M5E4 152 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 GFI1BQ5VTD9 330 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 PQLC2Q6ZP29 291 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 INO80EQ8NBZ0 244 aaPredicted RBP7.28□□□□□ -1.24
CCM2-208ENST00000476594 ZNF680Q8NEM1 530 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 HYDINQ4G0P3 5121 aa7.28□□□□□ -1.24
CCM2-208ENST00000476594 TRBV7-9A0A0J9YWB2 115 aa7.27□□□□□ -1.25
CCM2-208ENST00000476594 C7orf71A4D174 169 aa7.27□□□□□ -1.25
CCM2-208ENST00000476594 PRAC2D3DTV9 90 aa7.27□□□□□ -1.25
CCM2-208ENST00000476594 J3KRW8 73 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms