RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SPATA24Q86W54 205 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 DYNAPQ8N1N2 210 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 YIPF7Q8N8F6 280 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 OR11H6Q8NGC7 330 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 OR5K1Q8NHB7 308 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 DTD1Q8TEA8 209 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 DNAJC9Q8WXX5 260 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 CCDC124Q96CT7 223 aaKnown RBP1.93□□□□□ -2.1
PTCD3-211ENST00000476215 MALSU1Q96EH3 234 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 MRAP2Q96G30 205 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 CDCA4Q9BXL8 241 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 HES4Q9HCC6 221 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 USE1Q9NZ43 259 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 MRM2Q9UI43 246 aaKnown RBP1.93□□□□□ -2.1
PTCD3-211ENST00000476215 ENPP5Q9UJA9 477 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 OR52A1Q9UKL2 312 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 SLC22A13Q9Y226 551 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 AP4S1Q9Y587 144 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 R4GMQ9 66 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 V9GYS6 101 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 DNAH7Q8WXX0 4024 aa1.93□□□□□ -2.1
PTCD3-211ENST00000476215 RYR3Q15413 4870 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 TENM2Q9NT68 2774 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 A0A1W2PQL4 384 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-211ENST00000476215 hADV38S2A0JD32 116 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 ODF3BA8MYP8 253 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 C8orf87E5RJ46 101 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 M0R129 80 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 TOR1AO14656 332 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 OVOL1O14753 267 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 ZNF737O75373 536 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 SULT1C4O75897 302 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 ATP5HO75947 161 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 RPP14O95059 124 aaKnown RBP1.92□□□□□ -2.1
PTCD3-211ENST00000476215 RBP4P02753 201 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 ZNF728P0DKX0 622 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 PIPP12273 146 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-211ENST00000476215 CCL3L1P16619 93 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 ERP29P30040 261 aaKnown RBP1.92□□□□□ -2.1
PTCD3-211ENST00000476215 RBP2P50120 134 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 DYNLT3P51808 116 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 SNRPGP62308 76 aaKnown RBP1.92□□□□□ -2.1
PTCD3-211ENST00000476215 BLCAPP62952 87 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 TMED1Q13445 227 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 PSG3Q16557 428 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 DNAL1Q4LDG9 190 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 C12orf73Q69YU5 71 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 PLEKHG7Q6ZR37 379 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 SLC25A26Q70HW3 274 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 MRPL52Q86TS9 123 aaKnown RBP1.92□□□□□ -2.1
PTCD3-211ENST00000476215 GID4Q8IVV7 300 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 Q8N2B8 174 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 WFDC9Q8NEX5 89 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 OR10P1Q8NGE3 313 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 OR13D1Q8NGV5 346 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 RPS4Y2Q8TD47 263 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 CEP19Q96LK0 163 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 ZNF286AQ9HBT8 521 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 HILPDAQ9Y5L2 63 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 STAB2Q8WWQ8 2551 aa1.92□□□□□ -2.1
PTCD3-211ENST00000476215 KIAA2026Q5HYC2 2103 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 IGKV1-9A0A0C4DH69 117 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 LOC100506127A0A0U1RQW1 187 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 DAPL1A0PJW8 107 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 OR4C45A6NMZ5 311 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 LY6LH3BQJ8 138 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 H3BSH0 61 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 J3QLW9 94 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 DEGS1O15121 323 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 HAND1O96004 215 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 LTAP01374 205 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 ISG15P05161 165 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 ATF1P18846 271 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 CD24P25063 80 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 EDDM3BP56851 147 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 KRTAP12-1P59990 96 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 CDC42P60953 191 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 AESQ08117 197 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 GRK1Q15835 563 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 Q3ZCU0 254 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 OR10J3Q5JRS4 329 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 MINOS1Q5TGZ0 78 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 TMEM244Q5VVB8 128 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 HEPN1Q6WQI6 88 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 NDUFA11Q86Y39 141 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 Q8IYB0 196 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 ACBD7Q8N6N7 88 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 OR4S1Q8NGB4 309 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 OR5D14Q8NGL3 314 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 PP6455Q8WZ26 134 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 ADAT3Q96EY9 351 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-211ENST00000476215 BORCS8Q96FH0 119 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 ZNF714Q96N38 554 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 TBX5Q99593 518 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 TTTY10Q9BZA0 68 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 CHST6Q9GZX3 395 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 TMEM133Q9H2Q1 129 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 GLS2Q9UI32 602 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 GNG8Q9UK08 70 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 HHLA2Q9UM44 414 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms