RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	ASCL2	Q99929	193 aa		7.39	□□□□□ -1.23
DMD-223	ENST00000475732	PRKDC	P78527	4128 aa	Known RBP	7.39	□□□□□ -1.23
DMD-223	ENST00000475732		A0A0J9YX75	114 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	CTXND1	A0A1B0GTU2	59 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	UMAD1	C9J7I0	102 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732		H3BMM0	161 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	NDUFB4	O95168	129 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	CXorf1	O96002	111 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	NHLRC4	P0CG21	123 aa	Predicted RBP	7.38	□□□□□ -1.23
DMD-223	ENST00000475732	ARL14EPL	P0DKL9	152 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	HLA-DRB4	P13762	266 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	HLA-DMB	P28068	263 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	NKX2-5	P52952	324 aa	Predicted RBP	7.38	□□□□□ -1.23
DMD-223	ENST00000475732	DEFB1	P60022	68 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	TRPT1	Q86TN4	253 aa	Known RBP	7.38	□□□□□ -1.23
DMD-223	ENST00000475732	TMED6	Q8WW62	240 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	RPUSD4	Q96CM3	377 aa	Known RBP	7.38	□□□□□ -1.23
DMD-223	ENST00000475732	AAMDC	Q9H7C9	122 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	HLA-DRB4	X5D2U9	266 aa		7.38	□□□□□ -1.23
DMD-223	ENST00000475732	ZNF705F	A8MVS1	300 aa	Predicted RBP	7.37	□□□□□ -1.23
DMD-223	ENST00000475732		F6UB75	175 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	UBE2C	O00762	179 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	NUTF2	P61970	127 aa	Known RBP	7.37	□□□□□ -1.23
DMD-223	ENST00000475732	ZNF726P1	Q15940	193 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	GDF5OS	Q5U4N7	250 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	MORN3	Q6PF18	240 aa	Predicted RBP	7.37	□□□□□ -1.23
DMD-223	ENST00000475732	DPPA3	Q6W0C5	159 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	SSX7	Q7RTT5	188 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	LYPD1	Q8N2G4	141 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	MRPL53	Q96EL3	112 aa	Known RBP	7.37	□□□□□ -1.23
DMD-223	ENST00000475732	PHYHIPL	Q96FC7	376 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	CSTL1	Q9H114	145 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	ZMAT4	Q9H898	229 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	PRELID1	Q9Y255	219 aa		7.37	□□□□□ -1.23
DMD-223	ENST00000475732	DUSP14	O95147	198 aa	Known RBP	7.36	□□□□□ -1.23
DMD-223	ENST00000475732	GCHFR	P30047	84 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	FHIT	P49789	147 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	RAN	P62826	216 aa	Known RBP	7.36	□□□□□ -1.23
DMD-223	ENST00000475732	ICAM4	Q14773	271 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	IQCF2	Q8IXL9	164 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	EXOC3-AS1	Q8N2X6	119 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	OR4B1	Q8NGF8	309 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	OR8A1	Q8NGG7	326 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	FAM213B	Q8TBF2	198 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	CLUHP3	Q96NS8	147 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	SPATA25	Q9BR10	227 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	TM2D3	Q9BRN9	247 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	TMEM167B	Q9NRX6	74 aa		7.36	□□□□□ -1.23
DMD-223	ENST00000475732	MAP1LC3B2	A6NCE7	125 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	CA1	P00915	261 aa	Predicted RBP	7.35	□□□□□ -1.23
DMD-223	ENST00000475732	IGKV3-20	P01619	116 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	ZNF705D	P0CH99	300 aa	Predicted RBP	7.35	□□□□□ -1.23
DMD-223	ENST00000475732	ZNF705B	P0CI00	300 aa	Predicted RBP	7.35	□□□□□ -1.23
DMD-223	ENST00000475732	RAB5C	P51148	216 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	CNN1	P51911	297 aa	Known RBP	7.35	□□□□□ -1.23
DMD-223	ENST00000475732	HIST1H1A	Q02539	215 aa	Predicted RBP	7.35	□□□□□ -1.23
DMD-223	ENST00000475732	FAM74A1	Q5RGS3	127 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732		Q6ZWC4	215 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	OR10J6P	Q8NGY7	276 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	SUN5	Q8TC36	379 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.35	□□□□□ -1.23
DMD-223	ENST00000475732	C1QTNF4	Q9BXJ3	329 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	MAP1LC3B	Q9GZQ8	125 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732		Q9H3A6	140 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	COL7A1	Q02388	2944 aa		7.35	□□□□□ -1.23
DMD-223	ENST00000475732	TG	P01266	2768 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	NBEAL2	Q6ZNJ1	2754 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	PGP	A6NDG6	321 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732		A8MTW9	85 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	PRAC2	D3DTV9	90 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732		M0R3E3	92 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	CSN1S1	P47710	185 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	SULT1A2	P50226	295 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	FGF8	P55075	233 aa	Predicted RBP	7.34	□□□□□ -1.23
DMD-223	ENST00000475732	DEFB135	Q30KP9	77 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	RXFP4	Q8TDU9	374 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	SFT2D1	Q8WV19	159 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	MBD3L1	Q8WWY6	194 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	OTOR	Q9NRC9	128 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	PPP1R14D	Q9NXH3	145 aa		7.34	□□□□□ -1.23
DMD-223	ENST00000475732	PRB4	P10163	310 aa	Predicted RBP	7.33	□□□□□ -1.24
DMD-223	ENST00000475732	CMTM2	Q8TAZ6	248 aa		7.33	□□□□□ -1.24
DMD-223	ENST00000475732	RNF183	Q96D59	192 aa		7.33	□□□□□ -1.24
DMD-223	ENST00000475732	RCHY1	Q96PM5	261 aa		7.33	□□□□□ -1.24
DMD-223	ENST00000475732	SLC35B3	Q9H1N7	401 aa		7.33	□□□□□ -1.24
DMD-223	ENST00000475732	TMPRSS5	Q9H3S3	457 aa		7.33	□□□□□ -1.24
DMD-223	ENST00000475732	TP53TG1	Q9Y2A0	90 aa		7.33	□□□□□ -1.24
DMD-223	ENST00000475732		A0A1W2PRE2	83 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	NPIPB6	E9PJ23	425 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	BOLA2-SMG1P6	H3BVE0	249 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	SPRY2	O43597	315 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	GIG44	P09565	113 aa	Predicted RBP	7.32	□□□□□ -1.24
DMD-223	ENST00000475732	FXYD7	P58549	80 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	AMTN	Q6UX39	209 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	ALKAL2	Q6UX46	152 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	ARL6IP6	Q8N6S5	226 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	OVOL2	Q9BRP0	275 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	RETN	Q9HD89	108 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	XCL2	Q9UBD3	114 aa		7.32	□□□□□ -1.24
DMD-223	ENST00000475732	DNAH9	Q9NYC9	4486 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms