RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 PRELID1Q9Y255 219 aa16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 HLA-DRB4X5D2U9 266 aa16.35■□□□□ 0.21
MCF2L2-209ENST00000475664 LOC102724200A0A096LPH7 203 aaPredicted RBP16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 A0A0J9YX75 114 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 ZNF705FA8MVS1 300 aaPredicted RBP16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 H3BMM0 161 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 M0R3E3 92 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 H2AFB1P0C5Y9 115 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 EBLN2Q6P2I7 272 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 STHQ8IWL8 128 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 IQCF2Q8IXL9 164 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 SFT2D1Q8WV19 159 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 TMPRSS5Q9H3S3 457 aa16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 PRKDCP78527 4128 aaKnown RBP16.34■□□□□ 0.21
MCF2L2-209ENST00000475664 RPL35AP18077 110 aaKnown RBP16.33■□□□□ 0.2
MCF2L2-209ENST00000475664 PRAC2D3DTV9 90 aa16.32■□□□□ 0.2
MCF2L2-209ENST00000475664 PRB4P10163 310 aaPredicted RBP16.32■□□□□ 0.2
MCF2L2-209ENST00000475664 OR8A1Q8NGG7 326 aa16.32■□□□□ 0.2
MCF2L2-209ENST00000475664 OTORQ9NRC9 128 aa16.32■□□□□ 0.2
MCF2L2-209ENST00000475664 CLUHP3Q96NS8 147 aa16.31■□□□□ 0.2
MCF2L2-209ENST00000475664 B9D2Q9BPU9 175 aa16.31■□□□□ 0.2
MCF2L2-209ENST00000475664 TRAV1-1A0A0B4J248 108 aa16.3■□□□□ 0.2
MCF2L2-209ENST00000475664 A8MTW9 85 aa16.3■□□□□ 0.2
MCF2L2-209ENST00000475664 ZNF705DP0CH99 300 aaPredicted RBP16.3■□□□□ 0.2
MCF2L2-209ENST00000475664 ZNF705BP0CI00 300 aaPredicted RBP16.3■□□□□ 0.2
MCF2L2-209ENST00000475664 KIR2DL5BA0A0G2JN68 375 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 KIR2DL5BA0A0G2JPC4 375 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 A0A1B0GV50 99 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 PGPA6NDG6 321 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 DUSP14O95147 198 aaKnown RBP16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 CNN1P51911 297 aaKnown RBP16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 APOC4P55056 127 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 HIST1H1AQ02539 215 aaPredicted RBP16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 HAGHQ16775 308 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 SBSPONQ8IVN8 264 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 KIR2DL5AQ8N109 375 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 KIR2DL5BQ8NHK3 375 aa16.29■□□□□ 0.2
MCF2L2-209ENST00000475664 A0A1W2PRE2 83 aa16.28■□□□□ 0.2
MCF2L2-209ENST00000475664 ZNF705EA8MWA4 302 aaPredicted RBP16.28■□□□□ 0.2
MCF2L2-209ENST00000475664 OR4B1Q8NGF8 309 aa16.28■□□□□ 0.2
MCF2L2-209ENST00000475664 YTHDF2Q9Y5A9 579 aaKnown RBP16.28■□□□□ 0.2
MCF2L2-209ENST00000475664 GGTLC3B5MD39 225 aa16.27■□□□□ 0.2
MCF2L2-209ENST00000475664 IGKV3-20P01619 116 aa16.27■□□□□ 0.2
MCF2L2-209ENST00000475664 UBE2G2P60604 165 aa16.27■□□□□ 0.2
MCF2L2-209ENST00000475664 MORN3Q6PF18 240 aaPredicted RBP16.27■□□□□ 0.2
MCF2L2-209ENST00000475664 TEX261Q6UWH6 196 aa16.27■□□□□ 0.2
MCF2L2-209ENST00000475664 CSTL1Q9H114 145 aa16.27■□□□□ 0.2
MCF2L2-209ENST00000475664 FAM74A7A6NL05 159 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 HBE1P02100 147 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 CSN1S1P47710 185 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 AMTNQ6UX39 209 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 ARL6IP6Q8N6S5 226 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 OR10J6PQ8NGY7 276 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 RXFP4Q8TDU9 374 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 ASCL2Q99929 193 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 ARL2-SNX15V9GYD0 113 aa16.26■□□□□ 0.19
MCF2L2-209ENST00000475664 DNAH9Q9NYC9 4486 aa16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 IGKV2-40A0A087WW87 121 aaPredicted RBP16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 NPIPB6E9PJ23 425 aa16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 TEX46H3BTG2 121 aa16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 IGKV2D-40P01614 121 aaPredicted RBP16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 GIG44P09565 113 aaPredicted RBP16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 CCL20P78556 96 aa16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 CMTM2Q8TAZ6 248 aa16.25■□□□□ 0.19
MCF2L2-209ENST00000475664 DIRC3C9JPN6 131 aa16.24■□□□□ 0.19
MCF2L2-209ENST00000475664 UBE2CO00762 179 aa16.24■□□□□ 0.19
MCF2L2-209ENST00000475664 SLC25A5P05141 298 aaKnown RBP16.24■□□□□ 0.19
MCF2L2-209ENST00000475664 SUMO1P63165 101 aaKnown RBP16.24■□□□□ 0.19
MCF2L2-209ENST00000475664 BLOC1S1P78537 153 aa16.24■□□□□ 0.19
MCF2L2-209ENST00000475664 C5orf17Q8NAS9 161 aa16.24■□□□□ 0.19
MCF2L2-209ENST00000475664 ZNF680Q8NEM1 530 aa16.24■□□□□ 0.19
MCF2L2-209ENST00000475664 CA1P00915 261 aaPredicted RBP16.23■□□□□ 0.19
MCF2L2-209ENST00000475664 PPT1P50897 306 aa16.23■□□□□ 0.19
MCF2L2-209ENST00000475664 C9orf47Q6ZRZ4 202 aa16.23■□□□□ 0.19
MCF2L2-209ENST00000475664 TM2D3Q9BRN9 247 aa16.23■□□□□ 0.19
MCF2L2-209ENST00000475664 NKX6-2Q9C056 277 aaPredicted RBP16.23■□□□□ 0.19
MCF2L2-209ENST00000475664 SLC35B3Q9H1N7 401 aa16.23■□□□□ 0.19
MCF2L2-209ENST00000475664 PAGE4O60829 102 aa16.22■□□□□ 0.19
MCF2L2-209ENST00000475664 NUTF2P61970 127 aaKnown RBP16.22■□□□□ 0.19
MCF2L2-209ENST00000475664 GNG5P63218 68 aa16.22■□□□□ 0.19
MCF2L2-209ENST00000475664 ERCC8Q13216 396 aa16.22■□□□□ 0.19
MCF2L2-209ENST00000475664 AGPAT4-IT1Q9H0P7 198 aa16.22■□□□□ 0.19
MCF2L2-209ENST00000475664 RPH3ALQ9UNE2 315 aa16.22■□□□□ 0.19
MCF2L2-209ENST00000475664 RBAKDNA6NC62 111 aa16.21■□□□□ 0.19
MCF2L2-209ENST00000475664 CT45A10P0DMU9 189 aa16.21■□□□□ 0.19
MCF2L2-209ENST00000475664 Q6ZWC4 215 aa16.21■□□□□ 0.19
MCF2L2-209ENST00000475664 VGLL1Q99990 258 aa16.21■□□□□ 0.19
MCF2L2-209ENST00000475664 EPDR1Q9UM22 224 aa16.21■□□□□ 0.19
MCF2L2-209ENST00000475664 IFNA7P01567 189 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 TCRAP04437 139 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 ATP5G3P48201 142 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 FXYD7P58549 80 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 PMS2P11Q13670 270 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 CST9LP1Q5W188 147 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 GOLT1AQ6ZVE7 132 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 CCDC28AQ8IWP9 274 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 LYPD6BQ8NI32 183 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 LINC00477Q96M19 166 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 ODF3Q96PU9 254 aa16.2■□□□□ 0.18
MCF2L2-209ENST00000475664 MANBALQ9NQG1 85 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms