RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 KLHL30-AS1Q8NEE0 82 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 OR2K2Q8NGT1 345 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 C11orf52Q96A22 123 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 TVP23CQ96ET8 276 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 RHPN1-AS1Q9BWJ2 59 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 TMPRSS5Q9H3S3 457 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 NAT8Q9UHE5 227 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 EPDR1Q9UM22 224 aa5.35□□□□□ -1.55
SHQ1-207ENST00000475558 TRBV6-1A0A0K0K1D8 114 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 RBAKDNA6NC62 111 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 C9JCJ5 164 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 ISLRO14498 428 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 MRPS12O15235 138 aaKnown RBP5.34□□□□□ -1.55
SHQ1-207ENST00000475558 CBLN1P23435 193 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 INSL3P51460 131 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 TCTEX1D4Q5JR98 221 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 SAPCD1Q5SSQ6 148 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 OR9G4Q8NGQ1 327 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 BLNKQ8WV28 456 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 GLMPQ8WWB7 406 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 ZNF503Q96F45 646 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 FMC1Q96HJ9 113 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 CITED2Q99967 270 aaPredicted RBP5.34□□□□□ -1.55
SHQ1-207ENST00000475558 MCRIP2Q9BUT9 160 aaKnown RBP5.34□□□□□ -1.55
SHQ1-207ENST00000475558 Q9H3A6 140 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 NRN1Q9NPD7 142 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 AURKAIP1Q9NWT8 199 aaPredicted RBP5.34□□□□□ -1.55
SHQ1-207ENST00000475558 ZNF586Q9NXT0 402 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 ZMAT5Q9UDW3 170 aaKnown RBP5.34□□□□□ -1.55
SHQ1-207ENST00000475558 ZFP30Q9Y2G7 519 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 KLF12Q9Y4X4 402 aa5.34□□□□□ -1.55
SHQ1-207ENST00000475558 IGHV4OR15-8A0A075B7B6 117 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 A0A087WW49 117 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 IGHV3-35A0A0C4DH35 117 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 DNASE2O00115 360 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-207ENST00000475558 OVOL1O14753 267 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 PPP1R2P9O14990 202 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 NDUFB4O95168 129 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 TRBV12-3P01733 135 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 APOC3P02656 99 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 PYYP10082 97 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 CD28P10747 220 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 FOLR2P14207 255 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 SYNJ2BPP57105 145 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 UBE2G2P60604 165 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 UBE2G1P62253 170 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 SNRPD3P62318 126 aaKnown RBP5.33□□□□□ -1.56
SHQ1-207ENST00000475558 RPL11P62913 178 aaKnown RBP5.33□□□□□ -1.56
SHQ1-207ENST00000475558 RPL19P84098 196 aaKnown RBP5.33□□□□□ -1.56
SHQ1-207ENST00000475558 FHL3Q13643 280 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 UNQ9165/PRO28630Q6UXU0 137 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 RBPMS2Q6ZRY4 209 aaKnown RBP5.33□□□□□ -1.56
SHQ1-207ENST00000475558 C11orf44Q8N8P7 122 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 CYB561D1Q8N8Q1 229 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 BTF3L4Q96K17 158 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 C16orf92Q96LL3 132 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 LINC00477Q96M19 166 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 OR5B12Q96R08 314 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 ATG101Q9BSB4 218 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 CTDSP1Q9GZU7 261 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 ZNF331Q9NQX6 463 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-207ENST00000475558 TMEM242Q9NWH2 141 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 PPP1R14DQ9NXH3 145 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 YTHDF2Q9Y5A9 579 aaKnown RBP5.33□□□□□ -1.56
SHQ1-207ENST00000475558 LENEPQ9Y5L5 61 aa5.33□□□□□ -1.56
SHQ1-207ENST00000475558 TENM3Q9P273 2699 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 A0A087WWC5 75 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 TRBV7-9A0A0J9YWB2 115 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 TMEM213A2RRL7 107 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 CXorf65A6NEN9 183 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 C2orf70A6NJV1 201 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 H3BQ15 152 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 MT-ND4LP03901 98 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 TCRAP04437 139 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 AKR1C3P42330 323 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 SRSF3P84103 164 aaKnown RBP5.32□□□□□ -1.56
SHQ1-207ENST00000475558 DEFA5Q01523 94 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 RHEBQ15382 184 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 PSG3Q16557 428 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 TMEM183BQ1AE95 376 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 MORN5Q5VZ52 161 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 LEMD1Q68G75 181 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 LCN12Q6JVE5 192 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 C10orf99Q6UWK7 81 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 TCF24Q7RTU0 167 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 SMIM7Q9BQ49 75 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 NDFIP1Q9BT67 221 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 GPR61Q9BZJ8 451 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 TUBA4BQ9H853 241 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 SDF2L1Q9HCN8 221 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 SMAD5-AS1Q9Y6J3 95 aa5.32□□□□□ -1.56
SHQ1-207ENST00000475558 OR4C46A6NHA9 309 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 C9JQL5 133 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 PEX7O00628 323 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 TSPAN4O14817 238 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 DUSP14O95147 198 aaKnown RBP5.31□□□□□ -1.56
SHQ1-207ENST00000475558 PF4P02776 101 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 RPL35P42766 123 aaKnown RBP5.31□□□□□ -1.56
SHQ1-207ENST00000475558 GNG4P50150 75 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 CEBPGP53567 150 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms