RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NUDT3O95989 172 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 TCRBP04435 133 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 ATP5G1P05496 136 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 CXCL2P19875 107 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 ATP5G3P48201 142 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 CAMLGP49069 296 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 VWC2Q2TAL6 325 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 GFI1BQ5VTD9 330 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 C10orf113Q5VZT2 155 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 LCN15Q6UWW0 184 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 NRARPQ7Z6K4 114 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 ZNF546Q86UE3 836 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 BPIFA4PQ86YQ2 179 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 LRRC20Q8TCA0 184 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 ZNF431Q8TF32 576 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-207ENST00000475549 ZNF586Q9NXT0 402 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 WDR83OSQ9Y284 106 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 TRAV26-1A0A087WT03 109 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 IGSF23A1L1A6 192 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 CENPXA8MT69 81 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 FAM25EA8MYX2 175 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 NPIPB6E9PJ23 425 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 COX7A2P2O60397 106 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 NDUFB4O95168 129 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 CAV2P51636 162 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 ERCC8Q13216 396 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 GCSAMLQ5JQS6 135 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 Q6ZQT7 251 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 ZNF493Q6ZR52 646 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 SSX7Q7RTT5 188 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 TMEM252Q8N6L7 170 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 TMEM263Q8WUH6 116 aaKnown RBP4.87□□□□□ -1.63
HDAC3-207ENST00000475549 CHAC2Q8WUX2 184 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 C16orf74Q96GX8 76 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 FAM19A4Q96LR4 140 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 SLC50A1Q9BRV3 221 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 ATG101Q9BSB4 218 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 Q9H8V8 135 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 NUDT15Q9NV35 164 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 PPP1R14DQ9NXH3 145 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 LSM5Q9Y4Y9 91 aaKnown RBP4.87□□□□□ -1.63
HDAC3-207ENST00000475549 HSPG2P98160 4391 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
HDAC3-207ENST00000475549 TRBV19A0A075B6N1 114 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 TRAV12-3A0A0B4J271 114 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 A0A0J9YY99 117 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 C5orf51A6NDU8 294 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 J3KRW8 73 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 L7N2F9 121 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 M0R3E3 92 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 ZNF324O75467 553 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-207ENST00000475549 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
HDAC3-207ENST00000475549 SULT1A1P50225 295 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 BCAP31P51572 246 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 VAMP2P63027 116 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 CD300CQ08708 224 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 OR5I1Q13606 314 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 ESRGQ1W209 222 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 CNPY1Q3B7I2 92 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 SOHLH1Q5JUK2 328 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 Q6ZRG5 221 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 S100A7AQ86SG5 101 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 C6orf223Q8N319 242 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 C12orf45Q8N5I9 185 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-207ENST00000475549 C11orf72Q8NBR9 251 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 VSIG2Q96IQ7 327 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 C2orf50Q96LR7 162 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 C20orf144Q9BQM9 153 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 AGPAT4-IT1Q9H0P7 198 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 LYRM2Q9NU23 88 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-207ENST00000475549 SLC39A9Q9NUM3 307 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 PXMP4Q9Y6I8 212 aa4.86□□□□□ -1.63
HDAC3-207ENST00000475549 GAGE12BA1L429 117 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 KLLNB2CW77 178 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 GAGE7O76087 117 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 GAGE12FP0CL80 117 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 GAGE12GP0CL81 117 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 GAGE12IP0CL82 117 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 PYYP10082 97 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 M6PRP20645 277 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 S100A11P31949 105 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 CCL18P55774 89 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 DAZ2Q13117 558 aaKnown RBP4.85□□□□□ -1.63
HDAC3-207ENST00000475549 RAB32Q13637 225 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 ZNF846Q147U1 533 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 Q6ZTI0 123 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 EXOC3-AS1Q8N2X6 119 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 OR10J6PQ8NGY7 276 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 RXFP4Q8TDU9 374 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 GNPNAT1Q96EK6 184 aaPredicted RBP4.85□□□□□ -1.63
HDAC3-207ENST00000475549 FAM167A-AS1Q96KT0 104 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 ODF3Q96PU9 254 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 TMPRSS5Q9H3S3 457 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 UQCC1Q9NVA1 299 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 TMEM14CQ9P0S9 112 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 RNF24Q9Y225 148 aa4.85□□□□□ -1.63
HDAC3-207ENST00000475549 DNAH5Q8TE73 4624 aa4.84□□□□□ -1.63
HDAC3-207ENST00000475549 UBE2L5PA0A1B0GUS4 154 aa4.84□□□□□ -1.63
HDAC3-207ENST00000475549 H0YIZ8 118 aa4.84□□□□□ -1.63
HDAC3-207ENST00000475549 H3BNG1 76 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms