RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
MCF2L-224ENST00000475524 CCL20P78556 96 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 CCDC28AQ8IWP9 274 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 RNF182Q8N6D2 247 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 CMTM2Q8TAZ6 248 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
MCF2L-224ENST00000475524 PRR25Q96S07 402 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 SAV1Q9H4B6 383 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-224ENST00000475524 YTHDF2Q9Y5A9 579 aaKnown RBP11.25□□□□□ -0.61
MCF2L-224ENST00000475524 MGAM2Q2M2H8 2515 aa11.25□□□□□ -0.61
MCF2L-224ENST00000475524 A0A0J9YX75 114 aa11.24□□□□□ -0.61
MCF2L-224ENST00000475524 FBLL1A6NHQ2 334 aaKnown RBP11.24□□□□□ -0.61
MCF2L-224ENST00000475524 PAGE4O60829 102 aa11.24□□□□□ -0.61
MCF2L-224ENST00000475524 DUSP14O95147 198 aaKnown RBP11.24□□□□□ -0.61
MCF2L-224ENST00000475524 BCL2P10415 239 aa11.24□□□□□ -0.61
MCF2L-224ENST00000475524 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
MCF2L-224ENST00000475524 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
MCF2L-224ENST00000475524 EBLN2Q6P2I7 272 aa11.24□□□□□ -0.61
MCF2L-224ENST00000475524 GNG13Q9P2W3 67 aa11.24□□□□□ -0.61
MCF2L-224ENST00000475524 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
MCF2L-224ENST00000475524 A0A1B0GV50 99 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 M0R3E3 92 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 UBE2G2P60604 165 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 OR8A1Q8NGG7 326 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
MCF2L-224ENST00000475524 DIRC3C9JPN6 131 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 F6UZH7 168 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 K7EQM0 130 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 MEF2BQ02080 365 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-224ENST00000475524 CST9LP1Q5W188 147 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 OR10J6PQ8NGY7 276 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 FAM210AQ96ND0 272 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 SMDT1Q9H4I9 107 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-224ENST00000475524 PPP1R14DQ9NXH3 145 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
MCF2L-224ENST00000475524 TRBV7-9A0A0J9YWB2 115 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 LOC102723971A0A1B0GUV8 181 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 C11orf94C9JXX5 98 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 H3BMM0 161 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 PDE6DO43924 150 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 TCRAP04437 139 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 ZNF506Q5JVG8 444 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 TRPT1Q86TN4 253 aaKnown RBP11.21□□□□□ -0.61
MCF2L-224ENST00000475524 APRG1Q8IVJ8 170 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 STHQ8IWL8 128 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 CYB561D1Q8N8Q1 229 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 LINC00477Q96M19 166 aa11.21□□□□□ -0.61
MCF2L-224ENST00000475524 RBFOX3A6NFN3 312 aa11.2□□□□□ -0.62
MCF2L-224ENST00000475524 ZNF705FA8MVS1 300 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-224ENST00000475524 ATP5G3P48201 142 aa11.2□□□□□ -0.62
MCF2L-224ENST00000475524 DEFB125Q8N687 156 aa11.2□□□□□ -0.62
MCF2L-224ENST00000475524 C11orf52Q96A22 123 aa11.2□□□□□ -0.62
MCF2L-224ENST00000475524 SRD5A3Q9H8P0 318 aa11.2□□□□□ -0.62
MCF2L-224ENST00000475524 MED9Q9NWA0 146 aa11.2□□□□□ -0.62
MCF2L-224ENST00000475524 LENEPQ9Y5L5 61 aa11.2□□□□□ -0.62
MCF2L-224ENST00000475524 PEX7O00628 323 aa11.19□□□□□ -0.62
MCF2L-224ENST00000475524 S100A9P06702 114 aaKnown RBP11.19□□□□□ -0.62
MCF2L-224ENST00000475524 IGHV4-30-4P0DP06 118 aa11.19□□□□□ -0.62
MCF2L-224ENST00000475524 ACTL10Q5JWF8 245 aa11.19□□□□□ -0.62
MCF2L-224ENST00000475524 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-224ENST00000475524 CITED4Q96RK1 184 aa11.19□□□□□ -0.62
MCF2L-224ENST00000475524 WFDC10AQ9H1F0 79 aa11.19□□□□□ -0.62
MCF2L-224ENST00000475524 NBEAL1Q6ZS30 2694 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 KIR2DL5BA0A0G2JN68 375 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 KIR2DL5BA0A0G2JPC4 375 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 PRAC2D3DTV9 90 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 F6UB75 175 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 TMEM250H0YL14 139 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 AMBPP02760 352 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
MCF2L-224ENST00000475524 NUTF2P61970 127 aaKnown RBP11.18□□□□□ -0.62
MCF2L-224ENST00000475524 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-224ENST00000475524 HAGHQ16775 308 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 TMEM78Q5T7P6 136 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 GDF5OSQ5U4N7 250 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 LINC00322Q6ZN03 302 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-224ENST00000475524 KIR2DL5AQ8N109 375 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 KIR2DL5BQ8NHK3 375 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 TUBA4BQ9H853 241 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 KLF12Q9Y4X4 402 aa11.18□□□□□ -0.62
MCF2L-224ENST00000475524 IGKV2-40A0A087WW87 121 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-224ENST00000475524 LOC102724200A0A096LPH7 203 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-224ENST00000475524 RAB19A4D1S5 217 aa11.17□□□□□ -0.62
MCF2L-224ENST00000475524 K7EIL1 84 aa11.17□□□□□ -0.62
MCF2L-224ENST00000475524 IGKV2D-40P01614 121 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-224ENST00000475524 GNG5P63218 68 aa11.17□□□□□ -0.62
MCF2L-224ENST00000475524 ZNF124Q15973 351 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 214.4 ms