RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 AAMDCQ9H7C9 122 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 CARHSP1Q9Y2V2 147 aaKnown RBP11.71□□□□□ -0.53
CPSF3-203ENST00000475482 HELTA6NFD8 242 aa11.7□□□□□ -0.54
CPSF3-203ENST00000475482 MRPS12O15235 138 aaKnown RBP11.7□□□□□ -0.54
CPSF3-203ENST00000475482 ZNF207O43670 478 aaKnown RBP11.7□□□□□ -0.54
CPSF3-203ENST00000475482 CBLN1P23435 193 aa11.7□□□□□ -0.54
CPSF3-203ENST00000475482 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
CPSF3-203ENST00000475482 SUMO1P63165 101 aaKnown RBP11.7□□□□□ -0.54
CPSF3-203ENST00000475482 C16orf54Q6UWD8 224 aa11.7□□□□□ -0.54
CPSF3-203ENST00000475482 LINC00322Q6ZN03 302 aaPredicted RBP11.7□□□□□ -0.54
CPSF3-203ENST00000475482 SVBPQ8N300 66 aa11.7□□□□□ -0.54
CPSF3-203ENST00000475482 NIPSNAP3BQ9BS92 247 aa11.7□□□□□ -0.54
CPSF3-203ENST00000475482 ZNF586Q9NXT0 402 aa11.7□□□□□ -0.54
CPSF3-203ENST00000475482 RYR3Q15413 4870 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 A0A087X0K7 114 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 H3BQ15 152 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 APOC3P02656 99 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 SAMD13Q5VXD3 122 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 SIGLEC15Q6ZMC9 328 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 GTSCR1Q86UQ5 136 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 CCDC28AQ8IWP9 274 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 CMTM2Q8TAZ6 248 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 HIST1H2BAQ96A08 127 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 C11orf52Q96A22 123 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 SLC50A1Q9BRV3 221 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 Q9H3A6 140 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 CLEC5AQ9NY25 188 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
CPSF3-203ENST00000475482 PGPA6NDG6 321 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 ZNF727A8MUV8 499 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 SLC25A5P05141 298 aaKnown RBP11.68□□□□□ -0.54
CPSF3-203ENST00000475482 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 DYNLRB2Q8TF09 96 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 GLMPQ8WWB7 406 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
CPSF3-203ENST00000475482 K7EQM0 130 aa11.67□□□□□ -0.54
CPSF3-203ENST00000475482 SNAPINO95295 136 aa11.67□□□□□ -0.54
CPSF3-203ENST00000475482 S100A9P06702 114 aaKnown RBP11.67□□□□□ -0.54
CPSF3-203ENST00000475482 CSN1S1P47710 185 aa11.67□□□□□ -0.54
CPSF3-203ENST00000475482 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
CPSF3-203ENST00000475482 FAM90A2PQ658T7 463 aa11.67□□□□□ -0.54
CPSF3-203ENST00000475482 SMIM7Q9BQ49 75 aa11.67□□□□□ -0.54
CPSF3-203ENST00000475482 MLXQ9UH92 298 aa11.67□□□□□ -0.54
CPSF3-203ENST00000475482 IGHV3-49A0A0A0MS15 119 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 IGHV3-66A0A0C4DH42 116 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 CHEK1O14757 476 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 NDUFB4O95168 129 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 APOHP02749 345 aaPredicted RBP11.66□□□□□ -0.54
CPSF3-203ENST00000475482 CD7P09564 240 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 ADCYAP1P18509 176 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 CNN1P51911 297 aaKnown RBP11.66□□□□□ -0.54
CPSF3-203ENST00000475482 PNRC1Q12796 327 aaPredicted RBP11.66□□□□□ -0.54
CPSF3-203ENST00000475482 ZNF674Q2M3X9 581 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 TMEM61Q8N0U2 210 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 PARLQ9H300 379 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 PRELID1Q9Y255 219 aa11.66□□□□□ -0.54
CPSF3-203ENST00000475482 IGHV3OR16-13A0A075B7E8 117 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 IGHV3-74A0A0B4J1X5 117 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 SERTM2A0A1B0GWG4 89 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 SCO2A0A1W2PP80 73 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 PEX7O00628 323 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 AKR1C3P42330 323 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 TMEM241Q24JQ0 296 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 MUC7Q8TAX7 377 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 TVP23CQ96ET8 276 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 NAT8Q9UHE5 227 aa11.65□□□□□ -0.54
CPSF3-203ENST00000475482 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
CPSF3-203ENST00000475482 H3BTX0 84 aa11.64□□□□□ -0.55
CPSF3-203ENST00000475482 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
CPSF3-203ENST00000475482 TAS2R60P59551 318 aa11.64□□□□□ -0.55
CPSF3-203ENST00000475482 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
CPSF3-203ENST00000475482 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
CPSF3-203ENST00000475482 TUBA4BQ9H853 241 aa11.64□□□□□ -0.55
CPSF3-203ENST00000475482 ZNF331Q9NQX6 463 aaPredicted RBP11.64□□□□□ -0.55
CPSF3-203ENST00000475482 FBLL1A6NHQ2 334 aaKnown RBP11.63□□□□□ -0.55
CPSF3-203ENST00000475482 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.63□□□□□ -0.55
CPSF3-203ENST00000475482 EXOC3-AS1Q8N2X6 119 aa11.63□□□□□ -0.55
CPSF3-203ENST00000475482 C2CD4CQ8TF44 421 aa11.63□□□□□ -0.55
CPSF3-203ENST00000475482 C17orf77Q96MU5 243 aa11.63□□□□□ -0.55
CPSF3-203ENST00000475482 NRN1Q9NPD7 142 aa11.63□□□□□ -0.55
CPSF3-203ENST00000475482 RBMY1BA6NDE4 496 aaKnown RBP11.62□□□□□ -0.55
CPSF3-203ENST00000475482 RBMY1EA6NEQ0 496 aaKnown RBP11.62□□□□□ -0.55
CPSF3-203ENST00000475482 OR11H12B2RN74 326 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 B4DEV8 164 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 C9JCJ5 164 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 M0R036 132 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 SLC17A3O00476 420 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 TCRAP04437 139 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 RBMY1DP0C7P1 496 aaKnown RBP11.62□□□□□ -0.55
CPSF3-203ENST00000475482 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
CPSF3-203ENST00000475482 UBE2G1P62253 170 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 PAFAH1B2P68402 229 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms