RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 MRPL23Q16540 153 aaKnown RBP12.02□□□□□ -0.49
RNF220-212ENST00000475378 SPANXN5Q5MJ07 72 aa12.02□□□□□ -0.49
RNF220-212ENST00000475378 NEGR1Q7Z3B1 354 aa12.02□□□□□ -0.49
RNF220-212ENST00000475378 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
RNF220-212ENST00000475378 LINC00528Q8N1L1 170 aa12.02□□□□□ -0.49
RNF220-212ENST00000475378 AP3S1Q92572 193 aa12.02□□□□□ -0.49
RNF220-212ENST00000475378 KLF12Q9Y4X4 402 aa12.02□□□□□ -0.49
RNF220-212ENST00000475378 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
RNF220-212ENST00000475378 LEPP41159 167 aa12.01□□□□□ -0.49
RNF220-212ENST00000475378 ANXA2RQ3ZCQ2 193 aa12.01□□□□□ -0.49
RNF220-212ENST00000475378 SCGB3A2Q96PL1 93 aa12.01□□□□□ -0.49
RNF220-212ENST00000475378 H3BP45 60 aa12□□□□□ -0.49
RNF220-212ENST00000475378 PRAF2O60831 178 aa12□□□□□ -0.49
RNF220-212ENST00000475378 ATP6V1G2O95670 118 aa12□□□□□ -0.49
RNF220-212ENST00000475378 ANXA7P20073 488 aaKnown RBP12□□□□□ -0.49
RNF220-212ENST00000475378 TCL1AP56279 114 aa12□□□□□ -0.49
RNF220-212ENST00000475378 SELENOTP62341 195 aa12□□□□□ -0.49
RNF220-212ENST00000475378 FHL2Q14192 279 aa12□□□□□ -0.49
RNF220-212ENST00000475378 C4orf46Q504U0 113 aa12□□□□□ -0.49
RNF220-212ENST00000475378 Q6ZSA8 131 aa12□□□□□ -0.49
RNF220-212ENST00000475378 Q8N814 137 aa12□□□□□ -0.49
RNF220-212ENST00000475378 ARL6Q9H0F7 186 aa12□□□□□ -0.49
RNF220-212ENST00000475378 ARV1Q9H2C2 271 aa12□□□□□ -0.49
RNF220-212ENST00000475378 VCX3AQ9NNX9 186 aa12□□□□□ -0.49
RNF220-212ENST00000475378 HHLA3Q9XRX5 114 aa12□□□□□ -0.49
RNF220-212ENST00000475378 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 SMCO3A2RU48 225 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 CRYGDP07320 174 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 SLAQ13239 276 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 S100A7AQ86SG5 101 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 LRTM2Q8N967 370 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 C8orf49Q96NF6 230 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 SCP2D1Q9UJQ7 156 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 RNF24Q9Y225 148 aa11.99□□□□□ -0.49
RNF220-212ENST00000475378 STRAPQ9Y3F4 350 aaKnown RBP11.99□□□□□ -0.49
RNF220-212ENST00000475378 A0A087WXM4 84 aa11.98□□□□□ -0.49
RNF220-212ENST00000475378 ANKRD20A5PA0PJZ0 165 aa11.98□□□□□ -0.49
RNF220-212ENST00000475378 C7orf71A4D174 169 aa11.98□□□□□ -0.49
RNF220-212ENST00000475378 H3BTX0 84 aa11.98□□□□□ -0.49
RNF220-212ENST00000475378 K7EPK0 472 aa11.98□□□□□ -0.49
RNF220-212ENST00000475378 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
RNF220-212ENST00000475378 EIF4E3Q8N5X7 224 aaKnown RBP11.98□□□□□ -0.49
RNF220-212ENST00000475378 SAT2Q96F10 170 aaPredicted RBP11.98□□□□□ -0.49
RNF220-212ENST00000475378 VGLL1Q99990 258 aa11.98□□□□□ -0.49
RNF220-212ENST00000475378 K7EQD1 137 aa11.97□□□□□ -0.49
RNF220-212ENST00000475378 CTDSPLO15194 276 aa11.97□□□□□ -0.49
RNF220-212ENST00000475378 SLC25A5P05141 298 aaKnown RBP11.97□□□□□ -0.49
RNF220-212ENST00000475378 KRTAP10-4P60372 401 aaPredicted RBP11.97□□□□□ -0.49
RNF220-212ENST00000475378 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
RNF220-212ENST00000475378 PXMP4Q9Y6I8 212 aa11.97□□□□□ -0.49
RNF220-212ENST00000475378 KLLNB2CW77 178 aa11.96□□□□□ -0.49
RNF220-212ENST00000475378 PSCAO43653 123 aa11.96□□□□□ -0.49
RNF220-212ENST00000475378 OXTP01178 125 aa11.96□□□□□ -0.49
RNF220-212ENST00000475378 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
RNF220-212ENST00000475378 IBA57Q5T440 356 aaKnown RBP11.96□□□□□ -0.49
RNF220-212ENST00000475378 MORN5Q5VZ52 161 aa11.96□□□□□ -0.49
RNF220-212ENST00000475378 BPIFA4PQ86YQ2 179 aa11.96□□□□□ -0.49
RNF220-212ENST00000475378 MRPL32Q9BYC8 188 aaKnown RBP11.96□□□□□ -0.49
RNF220-212ENST00000475378 MRPL16Q9NX20 251 aaKnown RBP11.96□□□□□ -0.49
RNF220-212ENST00000475378 PKHD1L1Q86WI1 4243 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 H3BQ15 152 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 SRIP30626 198 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 CD300CQ08708 224 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 BTN1A1Q13410 526 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 CTF1Q16619 201 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 PXDC1Q5TGL8 231 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 FAM19A4Q96LR4 140 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 NAA50Q9GZZ1 169 aaKnown RBP11.95□□□□□ -0.5
RNF220-212ENST00000475378 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 RABL2BQ9UNT1 228 aa11.95□□□□□ -0.5
RNF220-212ENST00000475378 CTDSP2O14595 271 aa11.94□□□□□ -0.5
RNF220-212ENST00000475378 CCNKO75909 580 aa11.94□□□□□ -0.5
RNF220-212ENST00000475378 SLC38A11Q08AI6 406 aa11.94□□□□□ -0.5
RNF220-212ENST00000475378 TMEM128Q5BJH2 165 aa11.94□□□□□ -0.5
RNF220-212ENST00000475378 E5RGE8 158 aa11.93□□□□□ -0.5
RNF220-212ENST00000475378 FNDC10F2Z333 226 aa11.93□□□□□ -0.5
RNF220-212ENST00000475378 RRAS2P62070 204 aaPredicted RBP11.93□□□□□ -0.5
RNF220-212ENST00000475378 OPCMLQ14982 345 aa11.93□□□□□ -0.5
RNF220-212ENST00000475378 TMEM37Q8WXS4 190 aa11.93□□□□□ -0.5
RNF220-212ENST00000475378 NPVFQ9HCQ7 196 aa11.93□□□□□ -0.5
RNF220-212ENST00000475378 MCUBQ9NWR8 336 aa11.93□□□□□ -0.5
RNF220-212ENST00000475378 RCL1Q9Y2P8 373 aaKnown RBP11.93□□□□□ -0.5
RNF220-212ENST00000475378 RGS5O15539 181 aa11.92□□□□□ -0.5
RNF220-212ENST00000475378 MPDU1O75352 247 aa11.92□□□□□ -0.5
RNF220-212ENST00000475378 ERCC8Q13216 396 aa11.92□□□□□ -0.5
RNF220-212ENST00000475378 IQCF2Q8IXL9 164 aa11.92□□□□□ -0.5
RNF220-212ENST00000475378 IBA57-AS1B1ANH7 110 aa11.91□□□□□ -0.5
RNF220-212ENST00000475378 HOXB5P09067 269 aa11.91□□□□□ -0.5
RNF220-212ENST00000475378 GYPEP15421 78 aa11.91□□□□□ -0.5
RNF220-212ENST00000475378 POLR2GP62487 172 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNF220-212ENST00000475378 ID3Q02535 119 aa11.91□□□□□ -0.5
RNF220-212ENST00000475378 ZNF415Q09FC8 603 aa11.91□□□□□ -0.5
RNF220-212ENST00000475378 IL18Q14116 193 aa11.91□□□□□ -0.5
RNF220-212ENST00000475378 PSENENQ9NZ42 101 aa11.91□□□□□ -0.5
RNF220-212ENST00000475378 TRGV4A0A0C4DH28 118 aa11.9□□□□□ -0.5
RNF220-212ENST00000475378 VAMP1P23763 118 aa11.9□□□□□ -0.5
RNF220-212ENST00000475378 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.5
RNF220-212ENST00000475378 Q6ZQT7 251 aa11.9□□□□□ -0.5
RNF220-212ENST00000475378 ZNF546Q86UE3 836 aa11.9□□□□□ -0.5
RNF220-212ENST00000475378 TRAV5A0A0B4J249 113 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms