RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 FAM167A-AS1Q96KT0 104 aa8.71□□□□□ -1.02
CLIP2-204ENST00000474962 AAMDCQ9H7C9 122 aa8.71□□□□□ -1.02
CLIP2-204ENST00000474962 ALMS1Q8TCU4 4167 aa8.71□□□□□ -1.02
CLIP2-204ENST00000474962 CTXND1A0A1B0GTU2 59 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 H3BQ15 152 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 PDE6HQ13956 83 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 ACTL10Q5JWF8 245 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 TMED6Q8WW62 240 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 RNF183Q96D59 192 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 C17orf77Q96MU5 243 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 ZNF586Q9NXT0 402 aa8.7□□□□□ -1.02
CLIP2-204ENST00000474962 KMT2AQ03164 3969 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 TRBV19A0A075B6N1 114 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 UBE2CO00762 179 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 SOCS3O14543 225 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 ZNF253O75346 499 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 EIF3GO75821 320 aaKnown RBP eCLIP8.69□□□□□ -1.02
CLIP2-204ENST00000474962 CXorf1O96002 111 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 STAG3L2P0CL84 134 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 STAG3L3P0CL85 134 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 RAB5CP51148 216 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 PMS2P11Q13670 270 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 PSG3Q16557 428 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 IGFL4Q6B9Z1 124 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 DPPA3Q6W0C5 159 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 RNF182Q8N6D2 247 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
CLIP2-204ENST00000474962 TP53TG1Q9Y2A0 90 aa8.69□□□□□ -1.02
CLIP2-204ENST00000474962 KIR2DL5BA0A0G2JN68 375 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 KIR2DL5BA0A0G2JPC4 375 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 CXorf65A6NEN9 183 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 KNCNA6PVL3 124 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
CLIP2-204ENST00000474962 RANP62826 216 aaKnown RBP8.68□□□□□ -1.02
CLIP2-204ENST00000474962 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 FOXI2Q6ZQN5 318 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 KIR2DL5AQ8N109 375 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 OR4B1Q8NGF8 309 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 KIR2DL5BQ8NHK3 375 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 FXYD5Q96DB9 178 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 SAT2Q96F10 170 aaPredicted RBP8.68□□□□□ -1.02
CLIP2-204ENST00000474962 TMEM167BQ9NRX6 74 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 PPP1R14DQ9NXH3 145 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 PRELID1Q9Y255 219 aa8.68□□□□□ -1.02
CLIP2-204ENST00000474962 TRAV8-2A0A0B4J237 113 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 TEX46H3BTG2 121 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 SLC17A3O00476 420 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 DUSP14O95147 198 aaKnown RBP8.67□□□□□ -1.02
CLIP2-204ENST00000474962 GCHFRP30047 84 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 CSN1S1P47710 185 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 LYPD1Q8N2G4 141 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 CMTM2Q8TAZ6 248 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 RPUSD4Q96CM3 377 aaKnown RBP8.67□□□□□ -1.02
CLIP2-204ENST00000474962 ZNF503Q96F45 646 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 MAP1LC3BQ9GZQ8 125 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 CSTL1Q9H114 145 aa8.67□□□□□ -1.02
CLIP2-204ENST00000474962 SAV1Q9H4B6 383 aaPredicted RBP8.67□□□□□ -1.02
CLIP2-204ENST00000474962 FRAS1Q86XX4 4008 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 HLA-DRB4P13762 266 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 HLA-DMBP28068 263 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 FGF8P55075 233 aaPredicted RBP8.66□□□□□ -1.02
CLIP2-204ENST00000474962 HIST1H1AQ02539 215 aaPredicted RBP8.66□□□□□ -1.02
CLIP2-204ENST00000474962 ICAM4Q14773 271 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 EXOC3-AS1Q8N2X6 119 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 OR10J6PQ8NGY7 276 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 HLA-DRB4X5D2U9 266 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 AGRNO00468 2067 aa8.66□□□□□ -1.02
CLIP2-204ENST00000474962 A0A0J9YX75 114 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 ZNF705FA8MVS1 300 aaPredicted RBP8.65□□□□□ -1.02
CLIP2-204ENST00000474962 F6UB75 175 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 BOLA2-SMG1P6H3BVE0 249 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 NDUFB4O95168 129 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 FHITP49789 147 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 SULT1A2P50226 295 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 ZNF726P1Q15940 193 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.02
CLIP2-204ENST00000474962 CEMP1Q6PRD7 247 aaPredicted RBP8.65□□□□□ -1.02
CLIP2-204ENST00000474962 RXFP4Q8TDU9 374 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 MRPL53Q96EL3 112 aaKnown RBP8.65□□□□□ -1.02
CLIP2-204ENST00000474962 Q9H3A6 140 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 OTORQ9NRC9 128 aa8.65□□□□□ -1.02
CLIP2-204ENST00000474962 A0A1B0GV50 99 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 PGPA6NDG6 321 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 H3BMM0 161 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 LY6G6CO95867 125 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 HBE1P02100 147 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 DEFB1P60022 68 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 GDF5OSQ5U4N7 250 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 ALKAL2Q6UX46 152 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 SSX7Q7RTT5 188 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 TRPT1Q86TN4 253 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms