RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 LINC00052Q96N35 136 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 MAP6D1Q9H9H5 199 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 GNG13Q9P2W3 67 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 GGTLC3B5MD39 225 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 PRAC2D3DTV9 90 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 TEX46H3BTG2 121 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 M0R3E3 92 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 PRB4P10163 310 aaPredicted RBP7.43□□□□□ -1.22
COL8A1-206ENST00000474648 PPT1P50897 306 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 CMC4P56277 68 aaPredicted RBP7.43□□□□□ -1.22
COL8A1-206ENST00000474648 DEFB131AP59861 70 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 SUMO1P63165 101 aaKnown RBP7.43□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF124Q15973 351 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 PSMG4Q5JS54 123 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 FAM110AQ9BQ89 295 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 OTORQ9NRC9 128 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 CLEC5AQ9NY25 188 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 ARL2-SNX15V9GYD0 113 aa7.43□□□□□ -1.22
COL8A1-206ENST00000474648 RAB14P61106 215 aa7.42□□□□□ -1.22
COL8A1-206ENST00000474648 SNRPD3P62318 126 aaKnown RBP7.42□□□□□ -1.22
COL8A1-206ENST00000474648 APRG1Q8IVJ8 170 aa7.42□□□□□ -1.22
COL8A1-206ENST00000474648 ARL6IP6Q8N6S5 226 aa7.42□□□□□ -1.22
COL8A1-206ENST00000474648 MRPL53Q96EL3 112 aaKnown RBP7.42□□□□□ -1.22
COL8A1-206ENST00000474648 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
COL8A1-206ENST00000474648 PRR25Q96S07 402 aa7.42□□□□□ -1.22
COL8A1-206ENST00000474648 RARRES2Q99969 163 aa7.42□□□□□ -1.22
COL8A1-206ENST00000474648 ZMAT5Q9UDW3 170 aaKnown RBP7.42□□□□□ -1.22
COL8A1-206ENST00000474648 PRELID1Q9Y255 219 aa7.42□□□□□ -1.22
COL8A1-206ENST00000474648 LOC102723971A0A1B0GUV8 181 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 RBFOX3A6NFN3 312 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 KNCNA6PVL3 124 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 OR11H12B2RN74 326 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 F6UB75 175 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 BCL2P10415 239 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 ATP5G3P48201 142 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 CD81P60033 236 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 HAGHQ16775 308 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 GDF5OSQ5U4N7 250 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 CST9LP1Q5W188 147 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 RPUSD4Q96CM3 377 aaKnown RBP7.41□□□□□ -1.22
COL8A1-206ENST00000474648 NKX6-2Q9C056 277 aaPredicted RBP7.41□□□□□ -1.22
COL8A1-206ENST00000474648 WFDC10AQ9H1F0 79 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 AAMDCQ9H7C9 122 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 MANBALQ9NQG1 85 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 EPDR1Q9UM22 224 aa7.41□□□□□ -1.22
COL8A1-206ENST00000474648 A0A0J9YX75 114 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 DIRC3C9JPN6 131 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 C11orf94C9JXX5 98 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 SLC25A5P05141 298 aaKnown RBP7.4□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF705DP0CH99 300 aaPredicted RBP7.4□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF705BP0CI00 300 aaPredicted RBP7.4□□□□□ -1.22
COL8A1-206ENST00000474648 GNG5P63218 68 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF506Q5JVG8 444 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 DEFB125Q8N687 156 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF738Q8NE65 137 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 OR8A1Q8NGG7 326 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 RXFP4Q8TDU9 374 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 FAM210AQ96ND0 272 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 SAV1Q9H4B6 383 aaPredicted RBP7.4□□□□□ -1.22
COL8A1-206ENST00000474648 VAX2Q9UIW0 290 aa7.4□□□□□ -1.22
COL8A1-206ENST00000474648 C9JQL5 133 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 H3BMM0 161 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 IFNA1P01562 189 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 PRB2P02812 416 aaPredicted RBP7.39□□□□□ -1.23
COL8A1-206ENST00000474648 TCRAP04437 139 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
COL8A1-206ENST00000474648 CSN1S1P47710 185 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
COL8A1-206ENST00000474648 ERCC8Q13216 396 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 FOXI2Q6ZQN5 318 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 GTSCR1Q86UQ5 136 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 C5orf17Q8NAS9 161 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 CMTM2Q8TAZ6 248 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 VGLL1Q99990 258 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 TXNDC17Q9BRA2 123 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 AGPAT4-IT1Q9H0P7 198 aa7.39□□□□□ -1.23
COL8A1-206ENST00000474648 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 LINC00862A6NCI5 91 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 RBMY1BA6NDE4 496 aaKnown RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 RBMY1EA6NEQ0 496 aaKnown RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 A8MTW9 85 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 IGLV2-11P01706 119 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 RBMY1DP0C7P1 496 aaKnown RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 HLA-DRB4P13762 266 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 TOR2AQ5JU69 321 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 EBLN2Q6P2I7 272 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 C9orf47Q6ZRZ4 202 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 GOLT1AQ6ZVE7 132 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 HIST1H2BAQ96A08 127 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 LINC00479Q96M42 142 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 SSBP4Q9BWG4 385 aaPredicted RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 MED9Q9NWA0 146 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 AURKAIP1Q9NWT8 199 aaPredicted RBP7.38□□□□□ -1.23
COL8A1-206ENST00000474648 KLF12Q9Y4X4 402 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 HLA-DRB4X5D2U9 266 aa7.38□□□□□ -1.23
COL8A1-206ENST00000474648 SCO2A0A1W2PP80 73 aa7.37□□□□□ -1.23
COL8A1-206ENST00000474648 RBAKDNA6NC62 111 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms