RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 LINC00479Q96M42 142 aa16.27■□□□□ 0.2
SMIM11A-204ENST00000474455 ZNF492Q9P255 531 aa16.27■□□□□ 0.2
SMIM11A-204ENST00000474455 EPDR1Q9UM22 224 aa16.27■□□□□ 0.2
SMIM11A-204ENST00000474455 NSD1Q96L73 2696 aaPredicted RBP16.27■□□□□ 0.2
SMIM11A-204ENST00000474455 FN1P02751 2386 aaKnown RBP16.27■□□□□ 0.2
SMIM11A-204ENST00000474455 PYYP10082 97 aa16.27■□□□□ 0.19
SMIM11A-204ENST00000474455 ETFRF1Q6IPR1 90 aa16.27■□□□□ 0.19
SMIM11A-204ENST00000474455 TMEM190Q8WZ59 177 aa16.27■□□□□ 0.19
SMIM11A-204ENST00000474455 IGKV1D-37A0A075B6S9 117 aa16.26■□□□□ 0.19
SMIM11A-204ENST00000474455 LINC01548A6NM66 108 aa16.26■□□□□ 0.19
SMIM11A-204ENST00000474455 NDPQ00604 133 aa16.26■□□□□ 0.19
SMIM11A-204ENST00000474455 C5orf56Q8N8D9 126 aa16.26■□□□□ 0.19
SMIM11A-204ENST00000474455 TOMM40O96008 361 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 OR2D3Q8NGH3 330 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 NPIPB3Q92617 1050 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 CHCHD1Q96BP2 118 aaKnown RBP16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 HIGD1CA8MV81 97 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 INAFM1C9JVW0 142 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 EBLN2Q6P2I7 272 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 RNASEKQ6P5S7 137 aaKnown RBP16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 Q6ZS46 218 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 GPR82Q96P67 336 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 GFRA4Q9GZZ7 299 aa16.25■□□□□ 0.19
SMIM11A-204ENST00000474455 IGHV7-81A0A0B4J1V7 117 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 C2orf70A6NJV1 201 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 RPL27AP46776 148 aaKnown RBP16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 BLCAPP62952 87 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 HBBP68871 147 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 WT1-ASQ06250 92 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 PVRIGQ6DKI7 326 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 FMC1Q96HJ9 113 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 RASL11BQ9BPW5 248 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 RPP21Q9H633 154 aaKnown RBP16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 FNDC4Q9H6D8 234 aaPredicted RBP16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 MOB4Q9Y3A3 225 aa16.24■□□□□ 0.19
SMIM11A-204ENST00000474455 A8MWL6 223 aa16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 TCF21O43680 179 aa16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 CNIH1O95406 144 aa16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 SRSF12Q8WXF0 261 aaKnown RBP16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 TMEM70Q9BUB7 260 aa16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 MLST8Q9BVC4 326 aa16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 PRSS22Q9GZN4 317 aa16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 TMEM160Q9NX00 188 aa16.23■□□□□ 0.19
SMIM11A-204ENST00000474455 TRAV34A0A0B4J273 112 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 FAM231BA6NCW3 169 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 TEX22C9J3V5 150 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 CRXO43186 299 aaPredicted RBP16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 SLC25A5P05141 298 aaKnown RBP16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 LCN12Q6JVE5 192 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 LINC00305Q7Z4B0 112 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 ZNF738Q8NE65 137 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 TRGV9Q99603 122 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 CRYGCP07315 174 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 ZNF562Q6V9R5 426 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 TEX29Q8N6K0 151 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 ST20Q9HBF5 79 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 COX11Q9Y6N1 276 aa16.22■□□□□ 0.19
SMIM11A-204ENST00000474455 EGR2P11161 476 aaPredicted RBP16.21■□□□□ 0.19
SMIM11A-204ENST00000474455 IGLC7A0M8Q6 106 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 HLA-DRB1P01911 266 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 Q56UQ5 140 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 PRR27Q6MZM9 219 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 C5orf17Q8NAS9 161 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 ESM1Q9NQ30 184 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 TEP1Q99973 2627 aaKnown RBP16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 OR5AL1P0C617 328 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 SRD5A1P18405 259 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 CAMPP49913 170 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 UBE2V1Q13404 147 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 ASPHD1Q5U4P2 390 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 ATOH7Q8N100 152 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 VPREB3Q9UKI3 123 aa16.2■□□□□ 0.18
SMIM11A-204ENST00000474455 C19orf71A6NCJ1 209 aa16.19■□□□□ 0.18
SMIM11A-204ENST00000474455 PGPA6NDG6 321 aa16.19■□□□□ 0.18
SMIM11A-204ENST00000474455 LTAP01374 205 aa16.19■□□□□ 0.18
SMIM11A-204ENST00000474455 IGLL1P15814 213 aa16.19■□□□□ 0.18
SMIM11A-204ENST00000474455 PTTG1IPP53801 180 aa16.19■□□□□ 0.18
SMIM11A-204ENST00000474455 LINC00527Q9UJ94 153 aa16.19■□□□□ 0.18
SMIM11A-204ENST00000474455 CORTO00230 105 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 NBEAP1P0C6P0 100 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 HINT1P49773 126 aaPredicted RBP16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 PLP1P60201 277 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 GNG5P63218 68 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 OR4F17Q8NGA8 305 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 ARPC1AQ92747 370 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 ATP6V0E1O15342 81 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 P01737 135 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 LEMD1Q68G75 181 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 URB1-AS1Q96HZ7 61 aa16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 SSBP4Q9BWG4 385 aaPredicted RBP16.18■□□□□ 0.18
SMIM11A-204ENST00000474455 MAJINQ3KP22 176 aa16.17■□□□□ 0.18
SMIM11A-204ENST00000474455 RBPMS2Q6ZRY4 209 aaKnown RBP16.17■□□□□ 0.18
SMIM11A-204ENST00000474455 NDFIP1Q9BT67 221 aa16.17■□□□□ 0.18
SMIM11A-204ENST00000474455 TRBV6-1A0A0K0K1D8 114 aa16.16■□□□□ 0.18
SMIM11A-204ENST00000474455 DAZAP1Q96EP5 407 aaKnown RBP16.16■□□□□ 0.18
SMIM11A-204ENST00000474455 MAST4O15021 2626 aa16.16■□□□□ 0.18
SMIM11A-204ENST00000474455 DNAJC9-AS1A6NH13 148 aa16.16■□□□□ 0.18
SMIM11A-204ENST00000474455 G3V318 75 aa16.16■□□□□ 0.18
SMIM11A-204ENST00000474455 OR1B1Q8NGR6 318 aa16.16■□□□□ 0.18
SMIM11A-204ENST00000474455 MRPL36Q9P0J6 103 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms