RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 F5H768 121 aa14.35□□□□□ -0.11
PDLIM4-206ENST00000474421 RTL8CO15255 209 aa14.35□□□□□ -0.11
PDLIM4-206ENST00000474421 SNRPCP09234 159 aaKnown RBP14.35□□□□□ -0.11
PDLIM4-206ENST00000474421 RPL29P47914 159 aaKnown RBP14.35□□□□□ -0.11
PDLIM4-206ENST00000474421 Q6ZR54 194 aa14.35□□□□□ -0.11
PDLIM4-206ENST00000474421 TMEM263Q8WUH6 116 aaKnown RBP14.35□□□□□ -0.11
PDLIM4-206ENST00000474421 SAT2Q96F10 170 aaPredicted RBP14.35□□□□□ -0.11
PDLIM4-206ENST00000474421 UBE2L5PA0A1B0GUS4 154 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 SLC17A3O00476 420 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 ZNF253O75346 499 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 BAXQ07812 192 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 ATP6V1FQ16864 119 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 TMEM252Q8N6L7 170 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 CHAC2Q8WUX2 184 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 S100ZQ8WXG8 99 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 ATG101Q9BSB4 218 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 SLC39A9Q9NUM3 307 aa14.34□□□□□ -0.11
PDLIM4-206ENST00000474421 PKHD1P08F94 4074 aa14.33□□□□□ -0.11
PDLIM4-206ENST00000474421 A0A1B0GVY2 172 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 H3BQ15 152 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 H3BTX0 84 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 IL15RAQ13261 267 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 RAB32Q13637 225 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 FCN2Q15485 313 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 CCDC28AQ8IWP9 274 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 RNASE8Q8TDE3 154 aaKnown RBP14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 ODF3Q96PU9 254 aa14.33□□□□□ -0.12
PDLIM4-206ENST00000474421 IGSF23A1L1A6 192 aa14.32□□□□□ -0.12
PDLIM4-206ENST00000474421 PRAC2D3DTV9 90 aa14.32□□□□□ -0.12
PDLIM4-206ENST00000474421 MPDU1O75352 247 aa14.32□□□□□ -0.12
PDLIM4-206ENST00000474421 PRB4P10163 310 aaPredicted RBP14.32□□□□□ -0.12
PDLIM4-206ENST00000474421 LEPP41159 167 aa14.32□□□□□ -0.12
PDLIM4-206ENST00000474421 MRPL53Q96EL3 112 aaKnown RBP14.32□□□□□ -0.12
PDLIM4-206ENST00000474421 TRAV5A0A0B4J249 113 aa14.31□□□□□ -0.12
PDLIM4-206ENST00000474421 FGF7P21781 194 aa14.31□□□□□ -0.12
PDLIM4-206ENST00000474421 ASAH1Q13510 395 aa14.31□□□□□ -0.12
PDLIM4-206ENST00000474421 GFI1BQ5VTD9 330 aa14.31□□□□□ -0.12
PDLIM4-206ENST00000474421 GPN1Q9HCN4 374 aaPredicted RBP14.31□□□□□ -0.12
PDLIM4-206ENST00000474421 NOP10Q9NPE3 64 aaKnown RBP14.31□□□□□ -0.12
PDLIM4-206ENST00000474421 NUDT3O95989 172 aa14.3□□□□□ -0.12
PDLIM4-206ENST00000474421 C1orf134Q5TEV5 83 aa14.3□□□□□ -0.12
PDLIM4-206ENST00000474421 ZNF586Q9NXT0 402 aa14.3□□□□□ -0.12
PDLIM4-206ENST00000474421 TMEM14CQ9P0S9 112 aa14.3□□□□□ -0.12
PDLIM4-206ENST00000474421 NPIPB6E9PJ23 425 aa14.29□□□□□ -0.12
PDLIM4-206ENST00000474421 CCL18P55774 89 aa14.29□□□□□ -0.12
PDLIM4-206ENST00000474421 KIR3DS1Q14943 382 aa14.29□□□□□ -0.12
PDLIM4-206ENST00000474421 PRELID1Q9Y255 219 aa14.29□□□□□ -0.12
PDLIM4-206ENST00000474421 KIAA1109Q2LD37 5005 aa14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 TRBV19A0A075B6N1 114 aa14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 RLN2P04090 185 aa14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 CT45A10P0DMU9 189 aa14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 HIST1H1EP10412 219 aaKnown RBP14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 PDE6HQ13956 83 aa14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 ENKURQ8TC29 256 aa14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 PARD6GQ9BYG4 376 aaPredicted RBP14.28□□□□□ -0.12
PDLIM4-206ENST00000474421 SNURFLB1AK76 121 aa14.27□□□□□ -0.13
PDLIM4-206ENST00000474421 PYGO2Q9BRQ0 406 aa14.27□□□□□ -0.13
PDLIM4-206ENST00000474421 NPCDR1Q9BY65 106 aa14.27□□□□□ -0.13
PDLIM4-206ENST00000474421 SLC25A31Q9H0C2 315 aa14.27□□□□□ -0.13
PDLIM4-206ENST00000474421 TIMM9Q9Y5J7 89 aa14.27□□□□□ -0.13
PDLIM4-206ENST00000474421 PKD1P98161 4303 aa14.26□□□□□ -0.13
PDLIM4-206ENST00000474421 LINC00612Q8N6U2 182 aa14.26□□□□□ -0.13
PDLIM4-206ENST00000474421 TRAV12-3A0A0B4J271 114 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 E5RGE8 158 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 J3KRW8 73 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 SLC25A5P05141 298 aaKnown RBP14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 MED14OSP0DP75 135 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 CLINT1Q14677 625 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 RNF141Q8WVD5 230 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 LINC00477Q96M19 166 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 NMES1Q9C002 83 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 AAMDCQ9H7C9 122 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 KCNIP2Q9NS61 270 aa14.25□□□□□ -0.13
PDLIM4-206ENST00000474421 CYCSP99999 105 aaKnown RBP14.24□□□□□ -0.13
PDLIM4-206ENST00000474421 OR5C1Q8NGR4 320 aa14.24□□□□□ -0.13
PDLIM4-206ENST00000474421 ZNRF2Q8NHG8 242 aa14.24□□□□□ -0.13
PDLIM4-206ENST00000474421 NBDYA0A0U1RRE5 68 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 M0R3E3 92 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 PRAF2O60831 178 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 UPK1BO75841 260 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 NDUFB4O95168 129 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 M6PRP20645 277 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 NHLH2Q02577 135 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 DAZ2Q13117 558 aaKnown RBP14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 OR5I1Q13606 314 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 ZNF680Q8NEM1 530 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 GNPNAT1Q96EK6 184 aaPredicted RBP14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 ZNF503Q96F45 646 aa14.23□□□□□ -0.13
PDLIM4-206ENST00000474421 DNAH11Q96DT5 4516 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 GAGE12BA1L429 117 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 C7orf71A4D174 169 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 GAGE7O76087 117 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 GAGE12FP0CL80 117 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 GAGE12GP0CL81 117 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 GAGE12IP0CL82 117 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 PYYP10082 97 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 THAP6Q8TBB0 222 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 BLNKQ8WV28 456 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 LINC00588Q9Y4M8 146 aa14.22□□□□□ -0.13
PDLIM4-206ENST00000474421 DYNC1H1Q14204 4646 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms