RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 PFDN5Q99471 154 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 SCRT1Q9BWW7 348 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 CLEC5AQ9NY25 188 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 X6R8D5 127 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 FRAS1Q86XX4 4008 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 HYPMO75409 117 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 STAG3L2P0CL84 134 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 STAG3L3P0CL85 134 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 HLA-DMBP28068 263 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 LCN15Q6UWW0 184 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 SIGLEC15Q6ZMC9 328 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 CSNK1G2-AS1Q8NCQ2 148 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 OR51G1Q8NGK1 321 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 C1QTNF4Q9BXJ3 329 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 MRPL32Q9BYC8 188 aaKnown RBP8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 NRN1Q9NPD7 142 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 APLNQ9ULZ1 77 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 FUT9Q9Y231 359 aa8.01□□□□□ -1.13
SEMA4D-216ENST00000474258 TRAV10A0A0B4J240 114 aa8□□□□□ -1.13
SEMA4D-216ENST00000474258 COX7A2P2O60397 106 aa8□□□□□ -1.13
SEMA4D-216ENST00000474258 FAM78BQ5VT40 261 aa8□□□□□ -1.13
SEMA4D-216ENST00000474258 C10orf113Q5VZT2 155 aa8□□□□□ -1.13
SEMA4D-216ENST00000474258 UQCC3Q6UW78 93 aa8□□□□□ -1.13
SEMA4D-216ENST00000474258 RNF125Q96EQ8 232 aa8□□□□□ -1.13
SEMA4D-216ENST00000474258 SLC25A22Q9H936 323 aa8□□□□□ -1.13
SEMA4D-216ENST00000474258 H3BMM0 161 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 CXorf1O96002 111 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 ORM2P19652 201 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 PSMB3P49720 205 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 SPATA31B1PQ5VZV4 182 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 Q6ZTC4 211 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 MIR17HGQ75NE6 70 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 SUN5Q8TC36 379 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 FAM167A-AS1Q96KT0 104 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 FAM210AQ96ND0 272 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 SMDT1Q9H4I9 107 aa7.99□□□□□ -1.13
SEMA4D-216ENST00000474258 NDUFS6O75380 124 aaKnown RBP7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 PPT1P50897 306 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 FGF8P55075 233 aaPredicted RBP7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 TAS2R45P59539 299 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 GUK1Q16774 197 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 PQLC2Q6ZP29 291 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 LINC00305Q7Z4B0 112 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 S100A7AQ86SG5 101 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 OR1B1Q8NGR6 318 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 PBDC1Q9BVG4 233 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 DOK5Q9P104 306 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 XCL2Q9UBD3 114 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 HIGD1AQ9Y241 93 aa7.98□□□□□ -1.13
SEMA4D-216ENST00000474258 IGHV4-4A0A075B6R2 117 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 RBFOX3A6NFN3 312 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 EIF3GO75821 320 aaKnown RBP eCLIP7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 HLA-DRB4P13762 266 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 GCHFRP30047 84 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 TAGLN2P37802 199 aaKnown RBP7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 ID1P41134 155 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 LYZP61626 148 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 PEA15Q15121 130 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 KHDC3LQ587J8 217 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 ZNF506Q5JVG8 444 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 MORN5Q5VZ52 161 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 ZNF503Q96F45 646 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 SHANK2-AS3Q9BTD1 123 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 SLC25A2Q9BXI2 301 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 SLC25A39Q9BZJ4 359 aaPredicted RBP7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 CELA1Q9UNI1 258 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 HLA-DRB4X5D2U9 266 aa7.97□□□□□ -1.13
SEMA4D-216ENST00000474258 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.13
SEMA4D-216ENST00000474258 DEFB131BA0A096LNP1 70 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 TRAV5A0A0B4J249 113 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 A0A1B0GV50 99 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 ARL14EPLP0DKL9 152 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 S100A7P31151 101 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 SRSF3P84103 164 aaKnown RBP7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 C12orf74Q32Q52 190 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 C1orf194Q5T5A4 169 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 LINC00052Q96N35 136 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 UHRF2Q96PU4 802 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 NEU1Q99519 415 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 TMPRSS5Q9H3S3 457 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 SAV1Q9H4B6 383 aaPredicted RBP7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 TMEM167BQ9NRX6 74 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 TMEM14CQ9P0S9 112 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 RNF24Q9Y225 148 aa7.96□□□□□ -1.14
SEMA4D-216ENST00000474258 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 C9JQL5 133 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 H3BRN7 92 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 IFNA1P01562 189 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 BCL2P10415 239 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 S100A1P23297 94 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 ICAM4Q14773 271 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 GDF5OSQ5U4N7 250 aa7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 ZNF705AQ6ZN79 300 aaPredicted RBP7.95□□□□□ -1.14
SEMA4D-216ENST00000474258 FOXI2Q6ZQN5 318 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms