RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 A0A1W2PPV4 95 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 OR10J4P0C629 311 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 NBEAP1P0C6P0 100 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 TSPOP30536 169 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 TAS2R45P59539 299 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 PDE6HQ13956 83 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 ACOT6Q3I5F7 207 aaPredicted RBP10.25□□□□□ -0.77
VAMP4-203ENST00000474047 BAP18Q8IXM2 172 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 C1orf158Q8N1D5 194 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 AQP10Q96PS8 301 aa10.25□□□□□ -0.77
VAMP4-203ENST00000474047 KMT2CQ8NEZ4 4911 aaKnown RBP10.25□□□□□ -0.77
VAMP4-203ENST00000474047 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 PRAC2D3DTV9 90 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 KHDC3LQ587J8 217 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 Q5BKY6 102 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 RNF141Q8WVD5 230 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 FAM167A-AS1Q96KT0 104 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 LINC01587Q99440 93 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 TENM2Q9NT68 2774 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 LOC102723971A0A1B0GUV8 181 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 CDKN1BP46527 198 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 ICAM4Q14773 271 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 EXOC3-AS1Q8N2X6 119 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 RPP25LQ8N5L8 163 aaKnown RBP10.24□□□□□ -0.77
VAMP4-203ENST00000474047 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 C2CD4CQ8TF44 421 aa10.24□□□□□ -0.77
VAMP4-203ENST00000474047 MRPL53Q96EL3 112 aaKnown RBP10.24□□□□□ -0.77
VAMP4-203ENST00000474047 NDUFB4O95168 129 aa10.23□□□□□ -0.77
VAMP4-203ENST00000474047 M6PRP20645 277 aa10.23□□□□□ -0.77
VAMP4-203ENST00000474047 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
VAMP4-203ENST00000474047 RYR3Q15413 4870 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 BORCS7-ASMTA0A0B4J1R7 106 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
VAMP4-203ENST00000474047 M0R3E3 92 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
VAMP4-203ENST00000474047 HTN1P15515 57 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 LEPP41159 167 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 UBE2L3P68036 154 aaKnown RBP10.22□□□□□ -0.77
VAMP4-203ENST00000474047 FAM122CQ6P4D5 195 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 ZNF767PQ75MW2 155 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 TMEM256Q8N2U0 113 aa10.22□□□□□ -0.77
VAMP4-203ENST00000474047 TRAV10A0A0B4J240 114 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 J3KRW8 73 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 CSN1S1P47710 185 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 RANP62826 216 aaKnown RBP10.21□□□□□ -0.77
VAMP4-203ENST00000474047 Q6ZTC4 211 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 OR10G4Q8NGN3 311 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 OR10G9Q8NGN4 311 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 OR10G7Q8NGN6 311 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 FXYD5Q96DB9 178 aa10.21□□□□□ -0.77
VAMP4-203ENST00000474047 IGLL5B9A064 214 aa10.21□□□□□ -0.78
VAMP4-203ENST00000474047 LY6G6CO95867 125 aa10.21□□□□□ -0.78
VAMP4-203ENST00000474047 RAB2AP61019 212 aa10.21□□□□□ -0.78
VAMP4-203ENST00000474047 C12orf74Q32Q52 190 aa10.21□□□□□ -0.78
VAMP4-203ENST00000474047 TNFSF18Q9UNG2 199 aa10.21□□□□□ -0.78
VAMP4-203ENST00000474047 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.78
VAMP4-203ENST00000474047 NPIPB6E9PJ23 425 aa10.2□□□□□ -0.78
VAMP4-203ENST00000474047 CT45A10P0DMU9 189 aa10.2□□□□□ -0.78
VAMP4-203ENST00000474047 ERCC8Q13216 396 aa10.2□□□□□ -0.78
VAMP4-203ENST00000474047 FAM222AQ5U5X8 452 aa10.2□□□□□ -0.78
VAMP4-203ENST00000474047 LINC00477Q96M19 166 aa10.2□□□□□ -0.78
VAMP4-203ENST00000474047 DEFB131BA0A096LNP1 70 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 MBP02144 154 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 ATP6V0CP27449 155 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 TMEM78Q5T7P6 136 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 PQLC2Q6ZP29 291 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 LYPD1Q8N2G4 141 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 PHYHIPLQ96FC7 376 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 C20orf144Q9BQM9 153 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 PSMG3Q9BT73 122 aaPredicted RBP10.19□□□□□ -0.78
VAMP4-203ENST00000474047 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 ARPC5O15511 151 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 EIF3GO75821 320 aaKnown RBP eCLIP10.19□□□□□ -0.78
VAMP4-203ENST00000474047 PRM2P04554 102 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 TAS2R60P59551 318 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 SERF2P84101 59 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 FAM74A1Q5RGS3 127 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 CCDC28AQ8IWP9 274 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 GNPNAT1Q96EK6 184 aaPredicted RBP10.19□□□□□ -0.78
VAMP4-203ENST00000474047 ODF3Q96PU9 254 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 Q9H3A6 140 aa10.19□□□□□ -0.78
VAMP4-203ENST00000474047 IGKV2-40A0A087WW87 121 aaPredicted RBP10.18□□□□□ -0.78
VAMP4-203ENST00000474047 RNF222A6NCQ9 220 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 H7BYZ3 331 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 HMGB3O15347 200 aaKnown RBP10.18□□□□□ -0.78
VAMP4-203ENST00000474047 IGKV2D-40P01614 121 aaPredicted RBP10.18□□□□□ -0.78
VAMP4-203ENST00000474047 CDC34P49427 236 aaPredicted RBP10.18□□□□□ -0.78
VAMP4-203ENST00000474047 TCTAP57738 103 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 DAD1P61803 113 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 RPL7L1Q6DKI1 246 aaKnown RBP10.18□□□□□ -0.78
VAMP4-203ENST00000474047 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 OR2G3Q8NGZ4 309 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 HYLS1Q96M11 299 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 KRTAP17-1Q9BYP8 105 aa10.18□□□□□ -0.78
VAMP4-203ENST00000474047 AGPAT4-IT1Q9H0P7 198 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms